Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RPS11P7-201ENST00000442125 465 ntBASIC5.93□□□□□ -1.46
RB1P06400 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.93□□□□□ -1.46
RB1P06400 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.93□□□□□ -1.46
RB1P06400 AC105918.1-201ENST00000474399 838 ntBASIC5.93□□□□□ -1.46
RB1P06400 DUTP1-201ENST00000493631 470 ntBASIC5.93□□□□□ -1.46
RB1P06400 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.93□□□□□ -1.46
RB1P06400 AC087272.1-201ENST00000523624 533 ntBASIC5.93□□□□□ -1.46
RB1P06400 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.93□□□□□ -1.46
RB1P06400 CR383656.6-201ENST00000550518 394 ntBASIC5.93□□□□□ -1.46
RB1P06400 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.93□□□□□ -1.46
RB1P06400 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.93□□□□□ -1.46
RB1P06400 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.93□□□□□ -1.46
RB1P06400 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.93□□□□□ -1.46
RB1P06400 AC095055.1-201ENST00000603472 1113 ntBASIC5.93□□□□□ -1.46
RB1P06400 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.93□□□□□ -1.46
RB1P06400 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RB1P06400 LINC01739-205ENST00000641890 573 ntBASIC5.93□□□□□ -1.46
RB1P06400 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RB1P06400 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
RB1P06400 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
RB1P06400 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
RB1P06400 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.93□□□□□ -1.46
RB1P06400 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RB1P06400 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RB1P06400 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.93□□□□□ -1.46
RB1P06400 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RB1P06400 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RB1P06400 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RB1P06400 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RB1P06400 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RB1P06400 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RB1P06400 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RB1P06400 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.92□□□□□ -1.46
RB1P06400 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
RB1P06400 MIR133B-201ENST00000362210 119 ntBASIC5.92□□□□□ -1.46
RB1P06400 AL009179.1-201ENST00000406085 265 ntBASIC5.92□□□□□ -1.46
RB1P06400 DUTP5-201ENST00000406790 469 ntBASIC5.92□□□□□ -1.46
RB1P06400 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.92□□□□□ -1.46
RB1P06400 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.92□□□□□ -1.46
RB1P06400 PRUNEP1-201ENST00000425846 705 ntBASIC5.92□□□□□ -1.46
RB1P06400 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.92□□□□□ -1.46
RB1P06400 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RB1P06400 AL606490.8-201ENST00000441624 319 ntBASIC5.92□□□□□ -1.46
RB1P06400 OSTCP1-201ENST00000455507 450 ntBASIC5.92□□□□□ -1.46
RB1P06400 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.92□□□□□ -1.46
RB1P06400 RPS29P22-201ENST00000472363 168 ntBASIC5.92□□□□□ -1.46
RB1P06400 AC079080.1-201ENST00000479841 822 ntBASIC5.92□□□□□ -1.46
RB1P06400 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.92□□□□□ -1.46
RB1P06400 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.92□□□□□ -1.46
RB1P06400 IGLV3-24-201ENST00000517477 197 ntBASIC5.92□□□□□ -1.46
RB1P06400 AC244502.2-201ENST00000543361 851 ntBASIC5.92□□□□□ -1.46
RB1P06400 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.92□□□□□ -1.46
RB1P06400 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.92□□□□□ -1.46
RB1P06400 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.92□□□□□ -1.46
RB1P06400 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.92□□□□□ -1.46
RB1P06400 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.92□□□□□ -1.46
RB1P06400 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.92□□□□□ -1.46
RB1P06400 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RB1P06400 MTCO1P7-201ENST00000419523 1542 ntBASIC5.92□□□□□ -1.46
RB1P06400 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RB1P06400 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.92□□□□□ -1.46
RB1P06400 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RB1P06400 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.92□□□□□ -1.46
RB1P06400 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RB1P06400 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
RB1P06400 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.92□□□□□ -1.46
RB1P06400 PWAR1-201ENST00000624188 2414 ntBASIC5.91□□□□□ -1.46
RB1P06400 AL731532.1-201ENST00000623972 4236 ntBASIC5.91□□□□□ -1.46
RB1P06400 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RB1P06400 MFSD8-239ENST00000641590 2479 ntBASIC5.91□□□□□ -1.46
RB1P06400 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RB1P06400 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
RB1P06400 AL121768.1-201ENST00000613917 2544 ntBASIC5.91□□□□□ -1.46
RB1P06400 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.91□□□□□ -1.46
RB1P06400 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RB1P06400 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
RB1P06400 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RB1P06400 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RB1P06400 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
RB1P06400 SNORA56-201ENST00000383966 129 ntBASIC5.91□□□□□ -1.46
RB1P06400 AL445213.1-201ENST00000412589 747 ntBASIC5.91□□□□□ -1.46
RB1P06400 SEPT7P8-201ENST00000413308 775 ntBASIC5.91□□□□□ -1.46
RB1P06400 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.91□□□□□ -1.46
RB1P06400 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.91□□□□□ -1.46
RB1P06400 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.91□□□□□ -1.46
RB1P06400 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.91□□□□□ -1.46
RB1P06400 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.91□□□□□ -1.46
RB1P06400 H3F3BP1-201ENST00000440551 403 ntBASIC5.91□□□□□ -1.46
RB1P06400 AC092106.1-201ENST00000444291 373 ntBASIC5.91□□□□□ -1.46
RB1P06400 DNAJB5P1-201ENST00000454004 806 ntBASIC5.91□□□□□ -1.46
RB1P06400 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.91□□□□□ -1.46
RB1P06400 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RB1P06400 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.91□□□□□ -1.46
RB1P06400 ASNSP4-201ENST00000511103 447 ntBASIC5.91□□□□□ -1.46
RB1P06400 RN7SKP67-201ENST00000515905 235 ntBASIC5.91□□□□□ -1.46
RB1P06400 RNU6-319P-201ENST00000516025 108 ntBASIC5.91□□□□□ -1.46
RB1P06400 OR4A6P-201ENST00000534364 970 ntBASIC5.91□□□□□ -1.46
RB1P06400 PCNPP1-201ENST00000552501 511 ntBASIC5.91□□□□□ -1.46
RB1P06400 AC011840.5-201ENST00000582125 771 ntBASIC5.91□□□□□ -1.46
RB1P06400 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms