Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 AC006115.2-201ENST00000596823 202 ntBASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 VN1R81P-201ENST00000602085 372 ntBASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 AL590410.1-201ENST00000617925 333 ntBASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 AC118658.2-201ENST00000618697 459 ntBASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 AC106730.3-201ENST00000624568 641 ntBASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 OR51C1P-202ENST00000641159 1444 ntBASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 MAPK10-338ENST00000641647 3362 ntBASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 AL163152.1-201ENST00000642001 374 ntBASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.29□□□□□ -1.4
HDAC6Q9UBN7 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 AC006484.1-201ENST00000435086 1884 ntBASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 MIR130A-201ENST00000385274 89 ntBASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 RNU1-77P-201ENST00000390868 162 ntBASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 USP9YP19-201ENST00000412165 485 ntBASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 AL139148.1-201ENST00000427122 680 ntBASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 MGAT2P2-201ENST00000427194 797 ntBASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 EEF1B2P5-201ENST00000444820 548 ntBASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 RPS23P9-201ENST00000448848 438 ntBASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 RN7SL172P-201ENST00000460535 303 ntBASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 AC108751.3-201ENST00000461814 1020 ntBASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 AC079080.1-201ENST00000479841 822 ntBASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 RPL7P39-201ENST00000481157 744 ntBASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 PDCL3P4-201ENST00000489621 720 ntBASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 NDUFA5P12-201ENST00000503796 343 ntBASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 PGAM1P13-201ENST00000507497 754 ntBASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 CDC42P3-201ENST00000518493 633 ntBASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 OR8Q1P-201ENST00000526467 655 ntBASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 AC005972.3-201ENST00000606304 481 ntBASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 AC037198.3-201ENST00000616754 526 ntBASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 MRRFP1-201ENST00000435941 1675 ntBASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HDAC6Q9UBN7 AC239868.2-201ENST00000564237 4527 ntBASIC6.27□□□□□ -1.4
HDAC6Q9UBN7 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.27□□□□□ -1.4
HDAC6Q9UBN7 MFSD8-239ENST00000641590 2479 ntBASIC6.27□□□□□ -1.4
HDAC6Q9UBN7 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 RNA5SP183-201ENST00000362452 119 ntBASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 OR6K3-202ENST00000368146 996 ntBASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 MIR223-201ENST00000385204 110 ntBASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 AC005042.1-201ENST00000393397 800 ntBASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 AL354766.1-201ENST00000423396 542 ntBASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 AJ239321.1-201ENST00000424255 564 ntBASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 AL590623.1-201ENST00000427864 105 ntBASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 AC138761.5-201ENST00000433967 325 ntBASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 RPL7P45-201ENST00000455851 743 ntBASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 NFU1-207ENST00000462320 558 ntTSL 4 BASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 RPS23P2-201ENST00000463671 415 ntBASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC6.27□□□□□ -1.41
HDAC6Q9UBN7 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms