Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 AP002505.2-201ENST00000623585 696 ntBASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 CYP4F35P-202ENST00000636121 390 ntBASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 AC073869.8-201ENST00000641806 335 ntBASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 AC120036.2-201ENST00000509729 1474 ntBASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.8□□□□□ -1.64
CLCF1Q9UBD9 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 AC005261.6-201ENST00000623072 1387 ntBASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 AC092451.3-201ENST00000625067 1343 ntBASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 PEX12P1-201ENST00000400284 1048 ntBASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 AC005033.1-201ENST00000428904 813 ntBASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 RPL5P2-201ENST00000429598 854 ntBASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 AC097486.1-201ENST00000515331 210 ntBASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 AC022832.1-201ENST00000530718 645 ntBASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 AC044860.2-201ENST00000561005 179 ntBASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 OOSP1P2-201ENST00000579644 351 ntBASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 AL021707.7-201ENST00000607991 416 ntBASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 AL121612.2-201ENST00000612261 482 ntBASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 AL139407.1-201ENST00000613826 1175 ntBASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 AC138627.1-204ENST00000641894 765 ntBASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 AL078621.3-201ENST00000623707 2042 ntBASIC4.79□□□□□ -1.64
CLCF1Q9UBD9 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 RNA5SP507-201ENST00000363603 121 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 U8.4-201ENST00000363626 134 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 SNORA70-201ENST00000384436 135 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 REREP1Y-201ENST00000422655 198 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 NPM1P48-201ENST00000436002 853 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 REREP2Y-201ENST00000439103 200 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 PTMAP6-201ENST00000439110 327 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 AC073465.2-201ENST00000440938 498 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 RNU7-157P-201ENST00000459600 66 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 PSAT1P4-201ENST00000466500 526 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 RPL15P21-201ENST00000495592 567 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 OR5M14P-201ENST00000506803 618 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 AC091912.1-201ENST00000511351 248 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 SNORA70.11-201ENST00000515987 138 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 SNORA70.13-201ENST00000516116 138 ntBASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.78□□□□□ -1.64
CLCF1Q9UBD9 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms