Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 MIR548Y-201ENST00000582739 110 ntBASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 AP003392.5-201ENST00000607857 415 ntBASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 AC245008.1-201ENST00000608123 476 ntBASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 RNU6-368P-201ENST00000620928 107 ntBASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 RNU6-538P-201ENST00000622329 107 ntBASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 AL122023.1-201ENST00000622847 530 ntBASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 AL132640.3-201ENST00000630473 177 ntBASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 MAPK10-287ENST00000641217 3037 ntBASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 AC137056.2-201ENST00000624055 1958 ntBASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 CDC27P2-201ENST00000425026 1922 ntBASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.37□□□□□ -1.39
TRIM39Q9HCM9 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 HSPD1P9-201ENST00000420325 1636 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AP002370.1-201ENST00000528055 1602 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AC006042.3-201ENST00000454684 1469 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AC011455.2-201ENST00000599320 3336 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 MTCO1P6-201ENST00000481192 1384 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 SAMMSON-210ENST00000641260 1308 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AC022905.1-201ENST00000503430 3048 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 TMSB4XP2-201ENST00000335179 210 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 SNORD16-201ENST00000362803 99 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 SNORD116.1-201ENST00000365628 92 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 SNORD116-1-201ENST00000384335 95 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 RNU6-729P-201ENST00000384399 107 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AC104297.1-201ENST00000393779 870 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 OOSP1-201ENST00000398992 1270 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 LINC01881-201ENST00000416103 412 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 RPL21P50-201ENST00000417698 477 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 ZNF885P-201ENST00000420174 1098 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 COX7BP2-201ENST00000437976 242 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 COX4I1P2-201ENST00000447446 547 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 RPL31P44-201ENST00000447680 377 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 RPL7P40-201ENST00000481703 745 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 RN7SL568P-201ENST00000493069 298 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AC093816.1-201ENST00000515076 913 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 RNA5SP418-201ENST00000515951 117 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AC084337.1-201ENST00000524809 686 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 CYCSP25-201ENST00000525280 316 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 PDCL2P2-201ENST00000533651 189 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AC010198.2-201ENST00000550612 259 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 NBEAP1-201ENST00000554452 979 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AC121758.1-202ENST00000556917 658 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AADACP1-206ENST00000561502 1193 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AL022161.1-201ENST00000604390 213 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AC073046.2-201ENST00000604756 527 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 AL451086.1-201ENST00000605596 223 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 SNORA74.4-201ENST00000607595 199 ntBASIC6.36□□□□□ -1.39
TRIM39Q9HCM9 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms