Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 RPL9P21-201ENST00000392269 505 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 RAB5CP1-201ENST00000395972 580 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AC026310.1-201ENST00000396004 378 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 DNAJC19P6-201ENST00000401853 280 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AL512430.2-201ENST00000406786 339 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AL139421.1-201ENST00000423010 169 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 USP12PX-201ENST00000432383 1057 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 ST13P20-201ENST00000447996 1065 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AC083806.1-201ENST00000468934 316 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AP003385.3-201ENST00000472498 287 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AC091874.2-201ENST00000505889 720 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AC098799.2-201ENST00000509466 868 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 RN7SKP244-201ENST00000516513 307 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AC092709.1-201ENST00000521355 1045 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 SNRPCP6-201ENST00000528310 210 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AP006587.5-201ENST00000532033 739 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 TPRKBP2-201ENST00000565969 475 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 ARGFXP2-201ENST00000579304 949 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AC127024.5-201ENST00000580085 462 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AC083899.3-201ENST00000603413 594 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AC064836.2-201ENST00000609491 462 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 AC025594.3-201ENST00000613068 790 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 MIR6849-201ENST00000618543 69 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 MIR6813-201ENST00000621638 56 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 MIR4278-201ENST00000636094 69 ntBASIC5.65□□□□□ -1.5
SSBP3Q9BWW4 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.65□□□□□ -1.51
SSBP3Q9BWW4 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC5.65□□□□□ -1.51
SSBP3Q9BWW4 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SSBP3Q9BWW4 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
SSBP3Q9BWW4 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
SSBP3Q9BWW4 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC5.65□□□□□ -1.51
SSBP3Q9BWW4 AC092646.2-201ENST00000431242 2095 ntBASIC5.65□□□□□ -1.51
SSBP3Q9BWW4 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.65□□□□□ -1.51
SSBP3Q9BWW4 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.65□□□□□ -1.51
SSBP3Q9BWW4 CUBNP3-201ENST00000457461 1784 ntBASIC5.65□□□□□ -1.51
SSBP3Q9BWW4 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC5.65□□□□□ -1.51
SSBP3Q9BWW4 AC007114.2-201ENST00000576014 4281 ntBASIC5.65□□□□□ -1.51
SSBP3Q9BWW4 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.65□□□□□ -1.51
SSBP3Q9BWW4 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
SSBP3Q9BWW4 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 AP000776.1-201ENST00000530032 1663 ntBASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 RNA5SP474-201ENST00000391234 90 ntBASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 UBBP1-201ENST00000392399 473 ntBASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 AL033519.1-201ENST00000407266 307 ntBASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 RNU2-41P-201ENST00000410991 178 ntBASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 AL109913.1-201ENST00000421173 514 ntBASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 DUTP4-201ENST00000424782 475 ntBASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 AL445991.1-201ENST00000450381 475 ntBASIC5.64□□□□□ -1.51
SSBP3Q9BWW4 AC092001.1-201ENST00000453012 261 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms