Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AL353743.3-201ENST00000442109 1468 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AC006042.3-201ENST00000454684 1469 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 Y_RNA.77-201ENST00000362962 107 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 OR8V1P-201ENST00000395193 873 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 VN1R12P-201ENST00000403778 876 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 SNORA11.5-201ENST00000408163 128 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 RPS26P13-201ENST00000419030 330 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AL157884.1-201ENST00000424561 454 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AC098826.1-201ENST00000433943 471 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 MTCYBP39-201ENST00000437562 491 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 ARMC4P1-201ENST00000438905 707 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AC093166.3-201ENST00000448785 303 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 MTCO2P18-201ENST00000457151 658 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 OR9A1P-202ENST00000484361 945 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AC090058.1-201ENST00000498788 435 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AC105420.1-201ENST00000504389 582 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 SNORA58-201ENST00000505219 137 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 HPRT1P2-201ENST00000505250 544 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AC112484.3-201ENST00000505910 329 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 MTND3P5-201ENST00000512798 333 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 SEPT10P1-201ENST00000517342 1162 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 C1GALT1P3-201ENST00000522049 819 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AC023310.2-201ENST00000553844 547 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AC104073.3-201ENST00000610942 955 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AL133243.1-201ENST00000614487 366 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AC022306.2-201ENST00000617563 647 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 MTCO1P28-201ENST00000574177 1528 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 SNX18P3-202ENST00000565670 1750 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 AC105114.1-201ENST00000624795 1862 ntBASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC6.28□□□□□ -1.4
TRIM48Q8IWZ4 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.27□□□□□ -1.4
TRIM48Q8IWZ4 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 AC025809.2-201ENST00000625085 1802 ntBASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 AC009120.2-204ENST00000621548 2032 ntBASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 NACA3P-201ENST00000359690 648 ntBASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 SNORD16-201ENST00000362803 99 ntBASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 SNORD35A-201ENST00000363389 86 ntBASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 RNU1-87P-201ENST00000363727 170 ntBASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 RNU5A-2P-201ENST00000384337 116 ntBASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 MIR142-201ENST00000384835 87 ntBASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 MIR621-201ENST00000384919 96 ntBASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 AC007068.1-201ENST00000396690 844 ntBASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 DNAJC19P6-201ENST00000401853 280 ntBASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 AL023284.3-201ENST00000407767 334 ntBASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 ZNF736P2Y-201ENST00000416040 1279 ntBASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 TAF13P2-201ENST00000416876 286 ntBASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 Z75741.2-201ENST00000417272 1167 ntBASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 RPL21P50-201ENST00000417698 477 ntBASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 MTND1P32-201ENST00000433043 938 ntBASIC6.27□□□□□ -1.41
TRIM48Q8IWZ4 TRIM60P9Y-201ENST00000438459 816 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms