Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.32□□□□□ -1.56
CXCL12P48061 AC021006.3-201ENST00000530771 192 ntBASIC5.32□□□□□ -1.56
CXCL12P48061 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CXCL12P48061 AC122688.1-201ENST00000541494 223 ntBASIC5.32□□□□□ -1.56
CXCL12P48061 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.32□□□□□ -1.56
CXCL12P48061 AC009117.1-201ENST00000563948 554 ntBASIC5.32□□□□□ -1.56
CXCL12P48061 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.32□□□□□ -1.56
CXCL12P48061 AC135068.12-201ENST00000637370 931 ntBASIC5.32□□□□□ -1.56
CXCL12P48061 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CXCL12P48061 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.32□□□□□ -1.56
CXCL12P48061 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CXCL12P48061 AC083843.2-201ENST00000568248 6253 ntBASIC5.32□□□□□ -1.56
CXCL12P48061 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CXCL12P48061 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.32□□□□□ -1.56
CXCL12P48061 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.32□□□□□ -1.56
CXCL12P48061 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.32□□□□□ -1.56
CXCL12P48061 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CXCL12P48061 AC132825.1-201ENST00000463573 2247 ntBASIC5.32□□□□□ -1.56
CXCL12P48061 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.32□□□□□ -1.56
CXCL12P48061 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.32□□□□□ -1.56
CXCL12P48061 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CXCL12P48061 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CXCL12P48061 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.31□□□□□ -1.56
CXCL12P48061 HSPD1P7-201ENST00000447985 1686 ntBASIC5.31□□□□□ -1.56
CXCL12P48061 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CXCL12P48061 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.31□□□□□ -1.56
CXCL12P48061 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL12P48061 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL12P48061 BX284613.1-201ENST00000452221 1641 ntBASIC5.31□□□□□ -1.56
CXCL12P48061 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.31□□□□□ -1.56
CXCL12P48061 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CXCL12P48061 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.31□□□□□ -1.56
CXCL12P48061 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CXCL12P48061 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL12P48061 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL12P48061 RN7SKP95-201ENST00000362860 303 ntBASIC5.31□□□□□ -1.56
CXCL12P48061 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL12P48061 RNU2-50P-201ENST00000410494 143 ntBASIC5.31□□□□□ -1.56
CXCL12P48061 MGAT2P2-201ENST00000427194 797 ntBASIC5.31□□□□□ -1.56
CXCL12P48061 RPS4XP16-201ENST00000427198 791 ntBASIC5.31□□□□□ -1.56
CXCL12P48061 AC073410.1-201ENST00000435125 589 ntBASIC5.31□□□□□ -1.56
CXCL12P48061 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.31□□□□□ -1.56
CXCL12P48061 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.31□□□□□ -1.56
CXCL12P48061 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.31□□□□□ -1.56
CXCL12P48061 RPL12P39-201ENST00000455456 496 ntBASIC5.31□□□□□ -1.56
CXCL12P48061 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.31□□□□□ -1.56
CXCL12P48061 IGLV2-34-201ENST00000490007 283 ntBASIC5.31□□□□□ -1.56
CXCL12P48061 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.31□□□□□ -1.56
CXCL12P48061 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CXCL12P48061 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.31□□□□□ -1.56
CXCL12P48061 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.31□□□□□ -1.56
CXCL12P48061 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.31□□□□□ -1.56
CXCL12P48061 RN7SL356P-201ENST00000582228 248 ntBASIC5.31□□□□□ -1.56
CXCL12P48061 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.31□□□□□ -1.56
CXCL12P48061 AC073869.8-201ENST00000641806 335 ntBASIC5.31□□□□□ -1.56
CXCL12P48061 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL12P48061 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CXCL12P48061 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL12P48061 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL12P48061 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL12P48061 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL12P48061 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL12P48061 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.31□□□□□ -1.56
CXCL12P48061 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.31□□□□□ -1.56
CXCL12P48061 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL12P48061 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL12P48061 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.31□□□□□ -1.56
CXCL12P48061 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CXCL12P48061 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL12P48061 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CXCL12P48061 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
CXCL12P48061 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CXCL12P48061 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.3□□□□□ -1.56
CXCL12P48061 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CXCL12P48061 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CXCL12P48061 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.3□□□□□ -1.56
CXCL12P48061 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CXCL12P48061 NCOA4P2-201ENST00000340589 1813 ntBASIC5.3□□□□□ -1.56
CXCL12P48061 AC114774.1-201ENST00000507410 1770 ntBASIC5.3□□□□□ -1.56
CXCL12P48061 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CXCL12P48061 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CXCL12P48061 RNU6-398P-201ENST00000384143 109 ntBASIC5.3□□□□□ -1.56
CXCL12P48061 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CXCL12P48061 RPS16P5-201ENST00000406501 404 ntBASIC5.3□□□□□ -1.56
CXCL12P48061 SNORA11-201ENST00000408789 128 ntBASIC5.3□□□□□ -1.56
CXCL12P48061 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.3□□□□□ -1.56
CXCL12P48061 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.3□□□□□ -1.56
CXCL12P48061 DNAJC19P7-201ENST00000428811 344 ntBASIC5.3□□□□□ -1.56
CXCL12P48061 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.3□□□□□ -1.56
CXCL12P48061 AL390879.1-201ENST00000439143 386 ntBASIC5.3□□□□□ -1.56
CXCL12P48061 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.3□□□□□ -1.56
CXCL12P48061 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.3□□□□□ -1.56
CXCL12P48061 AC058823.1-201ENST00000485315 474 ntBASIC5.3□□□□□ -1.56
CXCL12P48061 RN7SL244P-201ENST00000493405 297 ntBASIC5.3□□□□□ -1.56
CXCL12P48061 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.3□□□□□ -1.56
CXCL12P48061 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.3□□□□□ -1.56
CXCL12P48061 HPRT1P1-201ENST00000509498 657 ntBASIC5.3□□□□□ -1.56
CXCL12P48061 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CXCL12P48061 OR5AN2P-201ENST00000534535 896 ntBASIC5.3□□□□□ -1.56
CXCL12P48061 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms