Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AL161912.3-201ENST00000605404 628 ntBASIC5.36□□□□□ -1.55
HMGCLP35914 AL022394.1-201ENST00000606979 292 ntBASIC5.36□□□□□ -1.55
HMGCLP35914 RNU6-84P-201ENST00000607737 102 ntBASIC5.36□□□□□ -1.55
HMGCLP35914 MIR6837-201ENST00000620884 64 ntBASIC5.36□□□□□ -1.55
HMGCLP35914 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.36□□□□□ -1.55
HMGCLP35914 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGCLP35914 AC099654.6-201ENST00000636487 512 ntBASIC5.36□□□□□ -1.55
HMGCLP35914 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGCLP35914 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.36□□□□□ -1.55
HMGCLP35914 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
HMGCLP35914 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
HMGCLP35914 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HMGCLP35914 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.36□□□□□ -1.55
HMGCLP35914 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HMGCLP35914 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.35□□□□□ -1.55
HMGCLP35914 MAPK10-328ENST00000641553 4009 ntBASIC5.35□□□□□ -1.55
HMGCLP35914 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
HMGCLP35914 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCLP35914 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCLP35914 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.35□□□□□ -1.55
HMGCLP35914 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HMGCLP35914 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.35□□□□□ -1.55
HMGCLP35914 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCLP35914 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCLP35914 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
HMGCLP35914 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.35□□□□□ -1.55
HMGCLP35914 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCLP35914 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCLP35914 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.35□□□□□ -1.55
HMGCLP35914 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.35□□□□□ -1.55
HMGCLP35914 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.35□□□□□ -1.55
HMGCLP35914 CYCSP6-201ENST00000434498 302 ntBASIC5.35□□□□□ -1.55
HMGCLP35914 PPIAP20-201ENST00000449839 135 ntBASIC5.35□□□□□ -1.55
HMGCLP35914 AC079168.1-201ENST00000458741 345 ntBASIC5.35□□□□□ -1.55
HMGCLP35914 AC058823.1-201ENST00000485315 474 ntBASIC5.35□□□□□ -1.55
HMGCLP35914 RN7SL423P-201ENST00000486202 304 ntBASIC5.35□□□□□ -1.55
HMGCLP35914 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.35□□□□□ -1.55
HMGCLP35914 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCLP35914 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGCLP35914 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.35□□□□□ -1.55
HMGCLP35914 CDC42P3-201ENST00000518493 633 ntBASIC5.35□□□□□ -1.55
HMGCLP35914 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGCLP35914 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.35□□□□□ -1.55
HMGCLP35914 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HMGCLP35914 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.35□□□□□ -1.55
HMGCLP35914 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGCLP35914 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HMGCLP35914 MIR3176-201ENST00000582210 90 ntBASIC5.35□□□□□ -1.55
HMGCLP35914 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.35□□□□□ -1.55
HMGCLP35914 AC009027.1-201ENST00000604510 479 ntBASIC5.35□□□□□ -1.55
HMGCLP35914 CASC19-264ENST00000641912 1184 ntBASIC5.35□□□□□ -1.55
HMGCLP35914 AL121839.2-201ENST00000565058 6943 ntBASIC5.35□□□□□ -1.55
HMGCLP35914 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
HMGCLP35914 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCLP35914 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCLP35914 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HMGCLP35914 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCLP35914 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCLP35914 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
HMGCLP35914 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
HMGCLP35914 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCLP35914 RNU1-19P-201ENST00000363306 165 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 RN7SKP162-201ENST00000363605 345 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HMGCLP35914 SNORA48.4-201ENST00000391089 134 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 EI24P3-201ENST00000399046 1062 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 HSPA8P15-201ENST00000401676 786 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 OR4K12P-201ENST00000406538 961 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 GPS2P1-201ENST00000411761 986 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 NPM1P4-201ENST00000414095 812 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.34□□□□□ -1.55
HMGCLP35914 AC079355.1-201ENST00000421770 223 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.34□□□□□ -1.55
HMGCLP35914 RPL7AP49-201ENST00000429522 581 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 AC124944.2-201ENST00000429866 1242 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCLP35914 AL591438.1-201ENST00000433508 581 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 RPS26P41-201ENST00000450370 284 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 AC011225.1-201ENST00000457751 369 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 AC135999.1-201ENST00000478962 479 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 RPL7P6-201ENST00000480903 738 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 EIF3LP3-201ENST00000495197 822 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 AC138409.2-202ENST00000507274 458 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 MTCO3P42-201ENST00000509488 518 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 AC021193.1-201ENST00000511607 420 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.34□□□□□ -1.55
HMGCLP35914 RPL7L1P4-201ENST00000513004 707 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 MTCO3P39-201ENST00000514812 518 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.34□□□□□ -1.55
HMGCLP35914 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.34□□□□□ -1.55
HMGCLP35914 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCLP35914 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGCLP35914 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGCLP35914 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCLP35914 AC027216.1-201ENST00000577726 685 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 AC005252.1-201ENST00000604518 1063 ntBASIC5.34□□□□□ -1.55
HMGCLP35914 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.34□□□□□ -1.55
HMGCLP35914 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
HMGCLP35914 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms