Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.7□□□□□ -1.34
RFC4P35249 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.7□□□□□ -1.34
RFC4P35249 PRPF38AP2-201ENST00000438179 851 ntBASIC6.7□□□□□ -1.34
RFC4P35249 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.7□□□□□ -1.34
RFC4P35249 NDUFA5P8-201ENST00000449019 346 ntBASIC6.7□□□□□ -1.34
RFC4P35249 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.7□□□□□ -1.34
RFC4P35249 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.7□□□□□ -1.34
RFC4P35249 PRELID3BP5-201ENST00000508612 460 ntBASIC6.7□□□□□ -1.34
RFC4P35249 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.7□□□□□ -1.34
RFC4P35249 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.7□□□□□ -1.34
RFC4P35249 OR7H2P-201ENST00000513483 306 ntBASIC6.7□□□□□ -1.34
RFC4P35249 RNA5SP116-201ENST00000516132 98 ntBASIC6.7□□□□□ -1.34
RFC4P35249 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.7□□□□□ -1.34
RFC4P35249 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.7□□□□□ -1.34
RFC4P35249 AC021006.3-201ENST00000530771 192 ntBASIC6.7□□□□□ -1.34
RFC4P35249 AC009117.1-201ENST00000563948 554 ntBASIC6.7□□□□□ -1.34
RFC4P35249 RN7SL356P-201ENST00000582228 248 ntBASIC6.7□□□□□ -1.34
RFC4P35249 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.7□□□□□ -1.34
RFC4P35249 NXF4-202ENST00000416098 1465 ntBASIC6.7□□□□□ -1.34
RFC4P35249 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.7□□□□□ -1.34
RFC4P35249 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RFC4P35249 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
RFC4P35249 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RFC4P35249 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RFC4P35249 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.7□□□□□ -1.34
RFC4P35249 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RFC4P35249 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.7□□□□□ -1.34
RFC4P35249 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.69□□□□□ -1.34
RFC4P35249 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RFC4P35249 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RFC4P35249 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
RFC4P35249 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RFC4P35249 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RFC4P35249 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RFC4P35249 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
RFC4P35249 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
RFC4P35249 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
RFC4P35249 U3.3-201ENST00000362986 216 ntBASIC6.69□□□□□ -1.34
RFC4P35249 RPS4XP16-201ENST00000427198 791 ntBASIC6.69□□□□□ -1.34
RFC4P35249 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.69□□□□□ -1.34
RFC4P35249 HSPD1P12-201ENST00000429127 1069 ntBASIC6.69□□□□□ -1.34
RFC4P35249 VDAC1P6-201ENST00000430062 855 ntBASIC6.69□□□□□ -1.34
RFC4P35249 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.69□□□□□ -1.34
RFC4P35249 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.69□□□□□ -1.34
RFC4P35249 NDUFA12P1-201ENST00000455914 406 ntBASIC6.69□□□□□ -1.34
RFC4P35249 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.69□□□□□ -1.34
RFC4P35249 RN7SKP260-201ENST00000516907 149 ntBASIC6.69□□□□□ -1.34
RFC4P35249 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.69□□□□□ -1.34
RFC4P35249 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.69□□□□□ -1.34
RFC4P35249 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.69□□□□□ -1.34
RFC4P35249 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.69□□□□□ -1.34
RFC4P35249 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.69□□□□□ -1.34
RFC4P35249 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.69□□□□□ -1.34
RFC4P35249 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RFC4P35249 AL117378.2-201ENST00000622916 1337 ntBASIC6.69□□□□□ -1.34
RFC4P35249 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RFC4P35249 AL078595.2-201ENST00000605309 1780 ntBASIC6.69□□□□□ -1.34
RFC4P35249 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.69□□□□□ -1.34
RFC4P35249 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RFC4P35249 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
RFC4P35249 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
RFC4P35249 BX284613.1-201ENST00000452221 1641 ntBASIC6.68□□□□□ -1.34
RFC4P35249 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.68□□□□□ -1.34
RFC4P35249 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.68□□□□□ -1.34
RFC4P35249 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
RFC4P35249 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RFC4P35249 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
RFC4P35249 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
RFC4P35249 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
RFC4P35249 RNU6-398P-201ENST00000384143 109 ntBASIC6.68□□□□□ -1.34
RFC4P35249 RPL23AP17-201ENST00000401064 499 ntBASIC6.68□□□□□ -1.34
RFC4P35249 DBIP1-201ENST00000401435 260 ntBASIC6.68□□□□□ -1.34
RFC4P35249 NPM1P38-201ENST00000403835 865 ntBASIC6.68□□□□□ -1.34
RFC4P35249 AL356967.1-201ENST00000406305 431 ntBASIC6.68□□□□□ -1.34
RFC4P35249 EI24P4-201ENST00000423683 1078 ntBASIC6.68□□□□□ -1.34
RFC4P35249 AC092905.1-201ENST00000467527 949 ntBASIC6.68□□□□□ -1.34
RFC4P35249 BTF3P13-201ENST00000513224 490 ntBASIC6.68□□□□□ -1.34
RFC4P35249 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.68□□□□□ -1.34
RFC4P35249 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.68□□□□□ -1.34
RFC4P35249 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RFC4P35249 OR5AN2P-201ENST00000534535 896 ntBASIC6.68□□□□□ -1.34
RFC4P35249 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.68□□□□□ -1.34
RFC4P35249 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RFC4P35249 UGT2B24P-201ENST00000514441 1597 ntBASIC6.68□□□□□ -1.34
RFC4P35249 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RFC4P35249 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
RFC4P35249 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RFC4P35249 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
RFC4P35249 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
RFC4P35249 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.68□□□□□ -1.34
RFC4P35249 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RFC4P35249 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RFC4P35249 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
RFC4P35249 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
RFC4P35249 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.67□□□□□ -1.34
RFC4P35249 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
RFC4P35249 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.67□□□□□ -1.34
RFC4P35249 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.67□□□□□ -1.34
RFC4P35249 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
RFC4P35249 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms