Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 RN7SL284P-201ENST00000498823 275 ntBASIC6.2□□□□□ -1.42
CIITAP33076 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.2□□□□□ -1.42
CIITAP33076 AC091912.1-201ENST00000511351 248 ntBASIC6.2□□□□□ -1.42
CIITAP33076 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.2□□□□□ -1.42
CIITAP33076 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.2□□□□□ -1.42
CIITAP33076 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CIITAP33076 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC6.2□□□□□ -1.42
CIITAP33076 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CIITAP33076 AC126177.5-201ENST00000549599 178 ntBASIC6.2□□□□□ -1.42
CIITAP33076 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.2□□□□□ -1.42
CIITAP33076 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC6.2□□□□□ -1.42
CIITAP33076 MTND4LP25-201ENST00000570218 163 ntBASIC6.2□□□□□ -1.42
CIITAP33076 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.2□□□□□ -1.42
CIITAP33076 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.2□□□□□ -1.42
CIITAP33076 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.2□□□□□ -1.42
CIITAP33076 BNIP3P35-201ENST00000604530 490 ntBASIC6.2□□□□□ -1.42
CIITAP33076 RNU6-84P-201ENST00000607737 102 ntBASIC6.2□□□□□ -1.42
CIITAP33076 AC008833.1-201ENST00000611633 691 ntBASIC6.2□□□□□ -1.42
CIITAP33076 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.2□□□□□ -1.42
CIITAP33076 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.2□□□□□ -1.42
CIITAP33076 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.2□□□□□ -1.42
CIITAP33076 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.2□□□□□ -1.42
CIITAP33076 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.2□□□□□ -1.42
CIITAP33076 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CIITAP33076 MSL3P1-202ENST00000440028 1468 ntBASIC6.2□□□□□ -1.42
CIITAP33076 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CIITAP33076 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CIITAP33076 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CIITAP33076 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CIITAP33076 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CIITAP33076 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.19□□□□□ -1.42
CIITAP33076 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.19□□□□□ -1.42
CIITAP33076 AC092070.2-203ENST00000598377 3644 ntBASIC6.19□□□□□ -1.42
CIITAP33076 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6.19□□□□□ -1.42
CIITAP33076 AC098592.2-201ENST00000413158 265 ntBASIC6.19□□□□□ -1.42
CIITAP33076 AC096644.3-201ENST00000416788 338 ntBASIC6.19□□□□□ -1.42
CIITAP33076 CFL1P1-202ENST00000432948 411 ntBASIC6.19□□□□□ -1.42
CIITAP33076 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC6.19□□□□□ -1.42
CIITAP33076 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC6.19□□□□□ -1.42
CIITAP33076 AL672138.1-201ENST00000450604 1015 ntBASIC6.19□□□□□ -1.42
CIITAP33076 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC6.19□□□□□ -1.42
CIITAP33076 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC6.19□□□□□ -1.42
CIITAP33076 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.19□□□□□ -1.42
CIITAP33076 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CIITAP33076 MTND6P2-201ENST00000512226 524 ntBASIC6.19□□□□□ -1.42
CIITAP33076 BX510359.5-201ENST00000515651 304 ntBASIC6.19□□□□□ -1.42
CIITAP33076 AC136777.2-201ENST00000522979 358 ntBASIC6.19□□□□□ -1.42
CIITAP33076 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.19□□□□□ -1.42
CIITAP33076 OR4A17P-201ENST00000526032 904 ntBASIC6.19□□□□□ -1.42
CIITAP33076 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CIITAP33076 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.19□□□□□ -1.42
CIITAP33076 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.19□□□□□ -1.42
CIITAP33076 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.19□□□□□ -1.42
CIITAP33076 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.19□□□□□ -1.42
CIITAP33076 AP005403.1-201ENST00000579720 229 ntBASIC6.19□□□□□ -1.42
CIITAP33076 MIR4433B-201ENST00000581329 102 ntBASIC6.19□□□□□ -1.42
CIITAP33076 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.19□□□□□ -1.42
CIITAP33076 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC6.19□□□□□ -1.42
CIITAP33076 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.19□□□□□ -1.42
CIITAP33076 IMMP1LP3-201ENST00000604197 224 ntBASIC6.19□□□□□ -1.42
CIITAP33076 QTRT1P1-201ENST00000604344 1078 ntBASIC6.19□□□□□ -1.42
CIITAP33076 AL139124.1-201ENST00000609123 421 ntBASIC6.19□□□□□ -1.42
CIITAP33076 AP000864.1-201ENST00000609424 650 ntBASIC6.19□□□□□ -1.42
CIITAP33076 WBP1LP8-201ENST00000617401 327 ntBASIC6.19□□□□□ -1.42
CIITAP33076 AC005840.5-201ENST00000619166 599 ntBASIC6.19□□□□□ -1.42
CIITAP33076 AC020763.5-201ENST00000623298 430 ntBASIC6.19□□□□□ -1.42
CIITAP33076 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC6.19□□□□□ -1.42
CIITAP33076 AP001153.1-201ENST00000641024 338 ntBASIC6.19□□□□□ -1.42
CIITAP33076 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CIITAP33076 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.19□□□□□ -1.42
CIITAP33076 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CIITAP33076 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CIITAP33076 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CIITAP33076 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CIITAP33076 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CIITAP33076 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CIITAP33076 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CIITAP33076 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.19□□□□□ -1.42
CIITAP33076 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.19□□□□□ -1.42
CIITAP33076 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CIITAP33076 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CIITAP33076 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
CIITAP33076 AL442128.2-201ENST00000620246 1824 ntBASIC6.18□□□□□ -1.42
CIITAP33076 OR51C1P-202ENST00000641159 1444 ntBASIC6.18□□□□□ -1.42
CIITAP33076 AC144833.1-201ENST00000567953 4089 ntBASIC6.18□□□□□ -1.42
CIITAP33076 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CIITAP33076 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.18□□□□□ -1.42
CIITAP33076 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CIITAP33076 RN7SKP186-201ENST00000365371 303 ntBASIC6.18□□□□□ -1.42
CIITAP33076 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.18□□□□□ -1.42
CIITAP33076 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CIITAP33076 AL390774.1-201ENST00000411924 246 ntBASIC6.18□□□□□ -1.42
CIITAP33076 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.18□□□□□ -1.42
CIITAP33076 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.18□□□□□ -1.42
CIITAP33076 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.18□□□□□ -1.42
CIITAP33076 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.18□□□□□ -1.42
CIITAP33076 NDUFA5P1-201ENST00000433858 341 ntBASIC6.18□□□□□ -1.42
CIITAP33076 RPS15AP29-201ENST00000445539 400 ntBASIC6.18□□□□□ -1.42
CIITAP33076 VN1R48P-201ENST00000448149 1036 ntBASIC6.18□□□□□ -1.42
CIITAP33076 RPS26P41-201ENST00000450370 284 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms