Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 MTATP6P19-201ENST00000413797 659 ntBASIC5.88□□□□□ -1.47
HOXC13P31276 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.88□□□□□ -1.47
HOXC13P31276 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.88□□□□□ -1.47
HOXC13P31276 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.88□□□□□ -1.47
HOXC13P31276 RCC2P2-201ENST00000422174 918 ntBASIC5.88□□□□□ -1.47
HOXC13P31276 AC021876.1-201ENST00000425959 359 ntBASIC5.88□□□□□ -1.47
HOXC13P31276 AL139148.1-201ENST00000427122 680 ntBASIC5.88□□□□□ -1.47
HOXC13P31276 PSMD10P3-201ENST00000437000 448 ntBASIC5.88□□□□□ -1.47
HOXC13P31276 RPL12P3-201ENST00000440080 396 ntBASIC5.88□□□□□ -1.47
HOXC13P31276 RPL7L1P1-201ENST00000448259 785 ntBASIC5.88□□□□□ -1.47
HOXC13P31276 snoU13.29-201ENST00000459370 104 ntBASIC5.88□□□□□ -1.47
HOXC13P31276 RPL35AP28-201ENST00000459730 331 ntBASIC5.88□□□□□ -1.47
HOXC13P31276 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC13P31276 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.88□□□□□ -1.47
HOXC13P31276 CBX1P5-201ENST00000475330 559 ntBASIC5.88□□□□□ -1.47
HOXC13P31276 RPS7P6-201ENST00000485777 579 ntBASIC5.88□□□□□ -1.47
HOXC13P31276 OR7E157P-201ENST00000494376 911 ntBASIC5.88□□□□□ -1.47
HOXC13P31276 AL671862.1-201ENST00000515851 349 ntBASIC5.88□□□□□ -1.47
HOXC13P31276 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC13P31276 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.88□□□□□ -1.47
HOXC13P31276 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.88□□□□□ -1.47
HOXC13P31276 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.88□□□□□ -1.47
HOXC13P31276 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.88□□□□□ -1.47
HOXC13P31276 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.88□□□□□ -1.47
HOXC13P31276 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.88□□□□□ -1.47
HOXC13P31276 SUGT1P3-202ENST00000604259 383 ntBASIC5.88□□□□□ -1.47
HOXC13P31276 Mico1.1-201ENST00000611698 204 ntBASIC5.88□□□□□ -1.47
HOXC13P31276 AC015722.2-201ENST00000622210 551 ntBASIC5.88□□□□□ -1.47
HOXC13P31276 AP002967.1-201ENST00000624203 539 ntBASIC5.88□□□□□ -1.47
HOXC13P31276 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.88□□□□□ -1.47
HOXC13P31276 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
HOXC13P31276 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.88□□□□□ -1.47
HOXC13P31276 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
HOXC13P31276 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC13P31276 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.88□□□□□ -1.47
HOXC13P31276 HSPA8P17-201ENST00000427029 1382 ntBASIC5.88□□□□□ -1.47
HOXC13P31276 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC13P31276 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
HOXC13P31276 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.88□□□□□ -1.47
HOXC13P31276 CASC19-281ENST00000642118 1554 ntBASIC5.88□□□□□ -1.47
HOXC13P31276 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HOXC13P31276 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.88□□□□□ -1.47
HOXC13P31276 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
HOXC13P31276 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.88□□□□□ -1.47
HOXC13P31276 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC13P31276 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
HOXC13P31276 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC13P31276 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC13P31276 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC13P31276 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC13P31276 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC13P31276 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC13P31276 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC13P31276 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC13P31276 RNU6-891P-201ENST00000384280 111 ntBASIC5.87□□□□□ -1.47
HOXC13P31276 AC233289.1-201ENST00000403700 508 ntBASIC5.87□□□□□ -1.47
HOXC13P31276 AP000534.2-201ENST00000412729 568 ntBASIC5.87□□□□□ -1.47
HOXC13P31276 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC13P31276 METTL15P3-201ENST00000415522 1221 ntBASIC5.87□□□□□ -1.47
HOXC13P31276 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC13P31276 CNOT7P2-201ENST00000441051 832 ntBASIC5.87□□□□□ -1.47
HOXC13P31276 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC13P31276 AL591363.1-201ENST00000450091 483 ntBASIC5.87□□□□□ -1.47
HOXC13P31276 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.87□□□□□ -1.47
HOXC13P31276 AC231760.1-201ENST00000498002 260 ntBASIC5.87□□□□□ -1.47
HOXC13P31276 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC13P31276 PGAM1P13-201ENST00000507497 754 ntBASIC5.87□□□□□ -1.47
HOXC13P31276 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC13P31276 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC13P31276 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC13P31276 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC13P31276 AP002373.2-201ENST00000541631 1060 ntBASIC5.87□□□□□ -1.47
HOXC13P31276 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC13P31276 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC13P31276 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC13P31276 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.87□□□□□ -1.47
HOXC13P31276 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.87□□□□□ -1.47
HOXC13P31276 AC090607.5-201ENST00000615692 224 ntBASIC5.87□□□□□ -1.47
HOXC13P31276 AC007683.2-201ENST00000624681 714 ntBASIC5.87□□□□□ -1.47
HOXC13P31276 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HOXC13P31276 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.87□□□□□ -1.47
HOXC13P31276 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC13P31276 MTCO1P8-201ENST00000416914 1523 ntBASIC5.87□□□□□ -1.47
HOXC13P31276 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC13P31276 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC13P31276 NLRP3P1-201ENST00000622303 1785 ntBASIC5.87□□□□□ -1.47
HOXC13P31276 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC13P31276 AL591135.1-201ENST00000401578 5914 ntBASIC5.87□□□□□ -1.47
HOXC13P31276 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
HOXC13P31276 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC13P31276 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC13P31276 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC13P31276 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC13P31276 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC13P31276 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HOXC13P31276 Z95114.1-201ENST00000624264 14574 ntBASIC5.86□□□□□ -1.47
HOXC13P31276 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
HOXC13P31276 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC13P31276 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC13P31276 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms