Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH3P22223 AL589994.1-201ENST00000404962 340 ntBASIC5.5□□□□□ -1.53
CDH3P22223 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH3P22223 BMS1P17-202ENST00000416720 316 ntBASIC5.5□□□□□ -1.53
CDH3P22223 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH3P22223 TNPO1P1-201ENST00000423641 1138 ntBASIC5.5□□□□□ -1.53
CDH3P22223 GAPDHP48-201ENST00000436626 961 ntBASIC5.5□□□□□ -1.53
CDH3P22223 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH3P22223 OR6C72P-201ENST00000451403 892 ntBASIC5.5□□□□□ -1.53
CDH3P22223 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH3P22223 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH3P22223 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CDH3P22223 GLUD1P3-202ENST00000508551 200 ntBASIC5.5□□□□□ -1.53
CDH3P22223 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH3P22223 AC074087.1-201ENST00000512059 724 ntBASIC5.5□□□□□ -1.53
CDH3P22223 RPL7L1P4-201ENST00000513004 707 ntBASIC5.5□□□□□ -1.53
CDH3P22223 RNU6-513P-201ENST00000516104 104 ntBASIC5.5□□□□□ -1.53
CDH3P22223 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH3P22223 AC078899.1-201ENST00000521432 1185 ntBASIC5.5□□□□□ -1.53
CDH3P22223 MRPS16P1-201ENST00000523462 412 ntBASIC5.5□□□□□ -1.53
CDH3P22223 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH3P22223 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH3P22223 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH3P22223 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH3P22223 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH3P22223 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH3P22223 AC117490.2-201ENST00000610042 594 ntBASIC5.5□□□□□ -1.53
CDH3P22223 AC007786.3-201ENST00000615154 596 ntBASIC5.5□□□□□ -1.53
CDH3P22223 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH3P22223 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH3P22223 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH3P22223 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH3P22223 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH3P22223 THAP12P8-201ENST00000447914 2115 ntBASIC5.5□□□□□ -1.53
CDH3P22223 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH3P22223 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH3P22223 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDH3P22223 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CDH3P22223 AC114786.1-201ENST00000512892 1415 ntBASIC5.49□□□□□ -1.53
CDH3P22223 MTCO1P11-201ENST00000429111 1528 ntBASIC5.49□□□□□ -1.53
CDH3P22223 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDH3P22223 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH3P22223 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH3P22223 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
CDH3P22223 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
CDH3P22223 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH3P22223 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH3P22223 RN7SKP145-201ENST00000363291 303 ntBASIC5.49□□□□□ -1.53
CDH3P22223 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH3P22223 OR6E1P-201ENST00000414424 923 ntBASIC5.49□□□□□ -1.53
CDH3P22223 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.49□□□□□ -1.53
CDH3P22223 VN1R21P-201ENST00000426703 765 ntBASIC5.49□□□□□ -1.53
CDH3P22223 AL121776.1-201ENST00000429337 372 ntBASIC5.49□□□□□ -1.53
CDH3P22223 AL450996.1-201ENST00000445574 1202 ntBASIC5.49□□□□□ -1.53
CDH3P22223 AC073909.1-201ENST00000447112 999 ntBASIC5.49□□□□□ -1.53
CDH3P22223 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH3P22223 AL356390.1-201ENST00000455684 397 ntBASIC5.49□□□□□ -1.53
CDH3P22223 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH3P22223 HMGN1P8-201ENST00000463578 288 ntBASIC5.49□□□□□ -1.53
CDH3P22223 RPS3AP15-201ENST00000483874 781 ntBASIC5.49□□□□□ -1.53
CDH3P22223 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH3P22223 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH3P22223 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH3P22223 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH3P22223 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH3P22223 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH3P22223 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH3P22223 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH3P22223 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.49□□□□□ -1.53
CDH3P22223 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.49□□□□□ -1.53
CDH3P22223 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.49□□□□□ -1.53
CDH3P22223 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH3P22223 AC063977.5-201ENST00000601044 974 ntBASIC5.49□□□□□ -1.53
CDH3P22223 AL589674.2-201ENST00000604304 337 ntBASIC5.49□□□□□ -1.53
CDH3P22223 AC104695.2-201ENST00000605056 775 ntBASIC5.49□□□□□ -1.53
CDH3P22223 AC007683.2-201ENST00000624681 714 ntBASIC5.49□□□□□ -1.53
CDH3P22223 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDH3P22223 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH3P22223 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDH3P22223 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH3P22223 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CDH3P22223 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CDH3P22223 AL513548.1-201ENST00000562904 1724 ntBASIC5.48□□□□□ -1.53
CDH3P22223 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH3P22223 AL360270.2-201ENST00000562952 5985 ntBASIC5.48□□□□□ -1.53
CDH3P22223 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH3P22223 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH3P22223 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH3P22223 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH3P22223 MFSD8-239ENST00000641590 2479 ntBASIC5.48□□□□□ -1.53
CDH3P22223 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH3P22223 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH3P22223 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH3P22223 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.48□□□□□ -1.53
CDH3P22223 TCP1P3-201ENST00000414406 1498 ntBASIC5.48□□□□□ -1.53
CDH3P22223 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH3P22223 OR5T3-201ENST00000303059 1023 ntBASIC5.48□□□□□ -1.53
CDH3P22223 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CDH3P22223 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH3P22223 SNORA51.1-201ENST00000363243 140 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms