Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC012065.4-201ENST00000602445 679 ntBASIC6.15□□□□□ -1.42
ATF4P18848 AP003465.2-201ENST00000602571 373 ntBASIC6.15□□□□□ -1.42
ATF4P18848 AL021808.1-201ENST00000604325 1117 ntBASIC6.15□□□□□ -1.42
ATF4P18848 AC005084.1-201ENST00000605160 304 ntBASIC6.15□□□□□ -1.42
ATF4P18848 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC6.15□□□□□ -1.42
ATF4P18848 AL592227.1-201ENST00000614748 126 ntBASIC6.15□□□□□ -1.42
ATF4P18848 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.15□□□□□ -1.42
ATF4P18848 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC6.15□□□□□ -1.42
ATF4P18848 LYG2-206ENST00000626374 650 ntTSL 5 BASIC6.15□□□□□ -1.42
ATF4P18848 AL356289.1-201ENST00000635446 743 ntTSL 3 BASIC6.15□□□□□ -1.42
ATF4P18848 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC6.15□□□□□ -1.42
ATF4P18848 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
ATF4P18848 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
ATF4P18848 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ATF4P18848 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ATF4P18848 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ATF4P18848 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC6.15□□□□□ -1.43
ATF4P18848 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
ATF4P18848 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.15□□□□□ -1.43
ATF4P18848 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ATF4P18848 TIMD4-201ENST00000274532 1369 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
ATF4P18848 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.15□□□□□ -1.43
ATF4P18848 AP000705.2-201ENST00000433524 1386 ntBASIC6.15□□□□□ -1.43
ATF4P18848 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.43
ATF4P18848 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
ATF4P18848 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
ATF4P18848 ERCC8-201ENST00000265038 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
ATF4P18848 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
ATF4P18848 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
ATF4P18848 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.14□□□□□ -1.43
ATF4P18848 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ATF4P18848 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
ATF4P18848 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.14□□□□□ -1.43
ATF4P18848 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.14□□□□□ -1.43
ATF4P18848 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ATF4P18848 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.14□□□□□ -1.43
ATF4P18848 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ATF4P18848 AC103591.2-201ENST00000265259 766 ntBASIC6.14□□□□□ -1.43
ATF4P18848 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ATF4P18848 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ATF4P18848 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ATF4P18848 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
ATF4P18848 RNU6-249P-201ENST00000363016 102 ntBASIC6.14□□□□□ -1.43
ATF4P18848 Y_RNA.209-201ENST00000364156 111 ntBASIC6.14□□□□□ -1.43
ATF4P18848 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC6.14□□□□□ -1.43
ATF4P18848 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ATF4P18848 FDPSP5-201ENST00000399474 1057 ntBASIC6.14□□□□□ -1.43
ATF4P18848 AC025750.1-201ENST00000399891 379 ntBASIC6.14□□□□□ -1.43
ATF4P18848 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC6.14□□□□□ -1.43
ATF4P18848 MIR1184-2-201ENST00000408263 99 ntBASIC6.14□□□□□ -1.43
ATF4P18848 MIR1184-1-201ENST00000408606 99 ntBASIC6.14□□□□□ -1.43
ATF4P18848 MIR1184-3-201ENST00000408676 99 ntBASIC6.14□□□□□ -1.43
ATF4P18848 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC6.14□□□□□ -1.43
ATF4P18848 AC006457.1-201ENST00000420733 392 ntBASIC6.14□□□□□ -1.43
ATF4P18848 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC6.14□□□□□ -1.43
ATF4P18848 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC6.14□□□□□ -1.43
ATF4P18848 IPMKP1-201ENST00000425988 855 ntBASIC6.14□□□□□ -1.43
ATF4P18848 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.14□□□□□ -1.43
ATF4P18848 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ATF4P18848 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC6.14□□□□□ -1.43
ATF4P18848 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC6.14□□□□□ -1.43
ATF4P18848 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC6.14□□□□□ -1.43
ATF4P18848 Z74696.2-201ENST00000436514 498 ntBASIC6.14□□□□□ -1.43
ATF4P18848 TVP23CP1-201ENST00000450317 639 ntBASIC6.14□□□□□ -1.43
ATF4P18848 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC6.14□□□□□ -1.43
ATF4P18848 AC019080.2-201ENST00000453859 394 ntBASIC6.14□□□□□ -1.43
ATF4P18848 MTCO3P2-201ENST00000457365 171 ntBASIC6.14□□□□□ -1.43
ATF4P18848 MEMO1P3-201ENST00000459811 302 ntBASIC6.14□□□□□ -1.43
ATF4P18848 RN7SL146P-201ENST00000472338 297 ntBASIC6.14□□□□□ -1.43
ATF4P18848 RN7SL368P-201ENST00000473384 277 ntBASIC6.14□□□□□ -1.43
ATF4P18848 AC009269.1-202ENST00000484381 469 ntBASIC6.14□□□□□ -1.43
ATF4P18848 ANK3-213ENST00000486349 493 ntTSL 2 BASIC6.14□□□□□ -1.43
ATF4P18848 RN7SL864P-201ENST00000493457 285 ntBASIC6.14□□□□□ -1.43
ATF4P18848 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.14□□□□□ -1.43
ATF4P18848 AC008040.4-201ENST00000494834 768 ntBASIC6.14□□□□□ -1.43
ATF4P18848 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.14□□□□□ -1.43
ATF4P18848 ST13P12-201ENST00000508958 1094 ntBASIC6.14□□□□□ -1.43
ATF4P18848 HSD3BP4-201ENST00000511509 1120 ntBASIC6.14□□□□□ -1.43
ATF4P18848 OR52H2P-201ENST00000514607 902 ntBASIC6.14□□□□□ -1.43
ATF4P18848 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.14□□□□□ -1.43
ATF4P18848 SNORA70.23-201ENST00000517218 151 ntBASIC6.14□□□□□ -1.43
ATF4P18848 DUXAP2-201ENST00000519198 589 ntBASIC6.14□□□□□ -1.43
ATF4P18848 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.14□□□□□ -1.43
ATF4P18848 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.14□□□□□ -1.43
ATF4P18848 IGKV2OR22-4-201ENST00000523309 367 ntBASIC6.14□□□□□ -1.43
ATF4P18848 PGAM1P8-201ENST00000526979 453 ntBASIC6.14□□□□□ -1.43
ATF4P18848 LINC00678-201ENST00000527083 786 ntTSL 3 BASIC6.14□□□□□ -1.43
ATF4P18848 AP000790.1-201ENST00000528891 737 ntBASIC6.14□□□□□ -1.43
ATF4P18848 OR4A45P-201ENST00000529954 901 ntBASIC6.14□□□□□ -1.43
ATF4P18848 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC6.14□□□□□ -1.43
ATF4P18848 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ATF4P18848 AC084816.1-211ENST00000540994 485 ntTSL 3 BASIC6.14□□□□□ -1.43
ATF4P18848 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
ATF4P18848 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC6.14□□□□□ -1.43
ATF4P18848 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.14□□□□□ -1.43
ATF4P18848 AC016180.1-201ENST00000567945 403 ntBASIC6.14□□□□□ -1.43
ATF4P18848 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.14□□□□□ -1.43
ATF4P18848 RN7SL154P-201ENST00000578043 324 ntBASIC6.14□□□□□ -1.43
ATF4P18848 AC087393.2-201ENST00000580962 504 ntTSL 3 BASIC6.14□□□□□ -1.43
ATF4P18848 MTATP6P3-201ENST00000581686 676 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms