Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 COX6B1P1-201ENST00000415962 213 ntBASIC6.15□□□□□ -1.43
COL2A1P02458 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.15□□□□□ -1.43
COL2A1P02458 USP9YP9-201ENST00000429406 715 ntBASIC6.15□□□□□ -1.43
COL2A1P02458 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.15□□□□□ -1.43
COL2A1P02458 RPS29P10-201ENST00000439197 166 ntBASIC6.15□□□□□ -1.43
COL2A1P02458 AC073648.4-201ENST00000442655 781 ntBASIC6.15□□□□□ -1.43
COL2A1P02458 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.15□□□□□ -1.43
COL2A1P02458 AC007537.2-201ENST00000472093 511 ntBASIC6.15□□□□□ -1.43
COL2A1P02458 AC097173.1-201ENST00000505862 819 ntBASIC6.15□□□□□ -1.43
COL2A1P02458 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.15□□□□□ -1.43
COL2A1P02458 AC079064.1-201ENST00000528365 362 ntBASIC6.15□□□□□ -1.43
COL2A1P02458 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.15□□□□□ -1.43
COL2A1P02458 AC087283.1-201ENST00000604029 1074 ntBASIC6.15□□□□□ -1.43
COL2A1P02458 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.15□□□□□ -1.43
COL2A1P02458 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COL2A1P02458 AC245389.2-201ENST00000616023 576 ntBASIC6.15□□□□□ -1.43
COL2A1P02458 AC242843.1-201ENST00000618702 573 ntBASIC6.15□□□□□ -1.43
COL2A1P02458 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
COL2A1P02458 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
COL2A1P02458 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL2A1P02458 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.14□□□□□ -1.43
COL2A1P02458 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.14□□□□□ -1.43
COL2A1P02458 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL2A1P02458 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL2A1P02458 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL2A1P02458 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL2A1P02458 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL2A1P02458 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL2A1P02458 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL2A1P02458 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.14□□□□□ -1.43
COL2A1P02458 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
COL2A1P02458 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
COL2A1P02458 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.14□□□□□ -1.43
COL2A1P02458 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL2A1P02458 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL2A1P02458 OR9G4-201ENST00000302957 984 ntBASIC6.14□□□□□ -1.43
COL2A1P02458 RN7SKP153-201ENST00000365026 316 ntBASIC6.14□□□□□ -1.43
COL2A1P02458 COX6CP17-201ENST00000421389 185 ntBASIC6.14□□□□□ -1.43
COL2A1P02458 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.14□□□□□ -1.43
COL2A1P02458 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL2A1P02458 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.14□□□□□ -1.43
COL2A1P02458 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.14□□□□□ -1.43
COL2A1P02458 NDUFA5P9-201ENST00000472609 340 ntBASIC6.14□□□□□ -1.43
COL2A1P02458 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.14□□□□□ -1.43
COL2A1P02458 RPL7P41-201ENST00000485823 957 ntBASIC6.14□□□□□ -1.43
COL2A1P02458 COX6B1P5-201ENST00000509843 249 ntBASIC6.14□□□□□ -1.43
COL2A1P02458 EDDM3DP-201ENST00000554692 434 ntBASIC6.14□□□□□ -1.43
COL2A1P02458 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL2A1P02458 MIR7853-201ENST00000584820 132 ntBASIC6.14□□□□□ -1.43
COL2A1P02458 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.14□□□□□ -1.43
COL2A1P02458 AL162431.4-201ENST00000604674 411 ntBASIC6.14□□□□□ -1.43
COL2A1P02458 MEMO1P5-201ENST00000604810 406 ntBASIC6.14□□□□□ -1.43
COL2A1P02458 EIF3FP1-201ENST00000613970 806 ntBASIC6.14□□□□□ -1.43
COL2A1P02458 MIR7703-201ENST00000620784 77 ntBASIC6.14□□□□□ -1.43
COL2A1P02458 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
COL2A1P02458 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL2A1P02458 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.14□□□□□ -1.43
COL2A1P02458 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
COL2A1P02458 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.14□□□□□ -1.43
COL2A1P02458 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.14□□□□□ -1.43
COL2A1P02458 MIPEPP2-201ENST00000422560 1819 ntBASIC6.14□□□□□ -1.43
COL2A1P02458 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL2A1P02458 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
COL2A1P02458 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL2A1P02458 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
COL2A1P02458 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.14□□□□□ -1.43
COL2A1P02458 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL2A1P02458 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
COL2A1P02458 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL2A1P02458 MAPK10-270ENST00000641102 3538 ntBASIC6.13□□□□□ -1.43
COL2A1P02458 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL2A1P02458 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.13□□□□□ -1.43
COL2A1P02458 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL2A1P02458 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL2A1P02458 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL2A1P02458 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL2A1P02458 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL2A1P02458 AL591135.1-201ENST00000401578 5914 ntBASIC6.13□□□□□ -1.43
COL2A1P02458 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL2A1P02458 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
COL2A1P02458 RN7SKP149-201ENST00000363008 344 ntBASIC6.13□□□□□ -1.43
COL2A1P02458 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.13□□□□□ -1.43
COL2A1P02458 OR8V1P-201ENST00000395193 873 ntBASIC6.13□□□□□ -1.43
COL2A1P02458 MTATP6P19-201ENST00000413797 659 ntBASIC6.13□□□□□ -1.43
COL2A1P02458 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.13□□□□□ -1.43
COL2A1P02458 RPL34P27-201ENST00000428810 349 ntBASIC6.13□□□□□ -1.43
COL2A1P02458 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.13□□□□□ -1.43
COL2A1P02458 MTCYBP21-201ENST00000443300 1113 ntBASIC6.13□□□□□ -1.43
COL2A1P02458 AL354714.3-201ENST00000447284 493 ntBASIC6.13□□□□□ -1.43
COL2A1P02458 RPL31P44-201ENST00000447680 377 ntBASIC6.13□□□□□ -1.43
COL2A1P02458 TAAR4P-201ENST00000454843 1039 ntBASIC6.13□□□□□ -1.43
COL2A1P02458 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
COL2A1P02458 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
COL2A1P02458 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.13□□□□□ -1.43
COL2A1P02458 OR7E128P-201ENST00000532736 1024 ntBASIC6.13□□□□□ -1.43
COL2A1P02458 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.13□□□□□ -1.43
COL2A1P02458 AC009117.1-201ENST00000563948 554 ntBASIC6.13□□□□□ -1.43
COL2A1P02458 ATP5J2P6-201ENST00000565203 266 ntBASIC6.13□□□□□ -1.43
COL2A1P02458 AC018558.5-201ENST00000565840 952 ntBASIC6.13□□□□□ -1.43
COL2A1P02458 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms