Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC211486.3-201ENST00000412694 621 ntBASIC5.62□□□□□ -1.51
CCDC188H7C350 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC188H7C350 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC188H7C350 AL035660.1-201ENST00000422041 222 ntBASIC5.62□□□□□ -1.51
CCDC188H7C350 AC046176.1-201ENST00000435260 1170 ntBASIC5.62□□□□□ -1.51
CCDC188H7C350 AC019084.1-201ENST00000457337 432 ntBASIC5.62□□□□□ -1.51
CCDC188H7C350 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC188H7C350 AC104629.2-201ENST00000468627 598 ntBASIC5.62□□□□□ -1.51
CCDC188H7C350 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC188H7C350 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC188H7C350 RNA5SP438-201ENST00000516561 112 ntBASIC5.62□□□□□ -1.51
CCDC188H7C350 AP002981.1-201ENST00000517692 975 ntBASIC5.62□□□□□ -1.51
CCDC188H7C350 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC188H7C350 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC188H7C350 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC188H7C350 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC188H7C350 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC188H7C350 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.62□□□□□ -1.51
CCDC188H7C350 RN7SL356P-201ENST00000582228 248 ntBASIC5.62□□□□□ -1.51
CCDC188H7C350 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC188H7C350 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.62□□□□□ -1.51
CCDC188H7C350 AC010487.1-201ENST00000594408 1172 ntBASIC5.62□□□□□ -1.51
CCDC188H7C350 AC009779.8-202ENST00000607990 932 ntBASIC5.62□□□□□ -1.51
CCDC188H7C350 CXADRP3-202ENST00000617265 1100 ntBASIC5.62□□□□□ -1.51
CCDC188H7C350 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC188H7C350 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC188H7C350 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC188H7C350 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCDC188H7C350 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC188H7C350 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC188H7C350 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC188H7C350 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC188H7C350 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC188H7C350 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CCDC188H7C350 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC188H7C350 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC188H7C350 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
CCDC188H7C350 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC188H7C350 OR9K1P-202ENST00000641111 3217 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC188H7C350 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC188H7C350 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC188H7C350 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC188H7C350 AC107977.1-201ENST00000355745 939 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 RN7SKP6-201ENST00000364795 319 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 AC083799.1-201ENST00000366451 910 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC188H7C350 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC188H7C350 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CCDC188H7C350 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC188H7C350 NPM1P10-201ENST00000398310 865 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC188H7C350 AC007738.1-201ENST00000413892 348 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 AL359885.1-201ENST00000415786 903 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC188H7C350 RPL24P2-201ENST00000421023 475 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 CDC27P2-201ENST00000425026 1922 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 AC113412.1-201ENST00000425840 504 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 NPM1P26-201ENST00000426339 738 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC188H7C350 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC188H7C350 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC188H7C350 RAB28P3-201ENST00000448325 597 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CCDC188H7C350 BUD31P2-201ENST00000449374 300 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC188H7C350 MRE11P1-201ENST00000464884 2127 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCDC188H7C350 RN7SL273P-201ENST00000481561 299 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 RN7SL814P-201ENST00000487715 300 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC188H7C350 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC188H7C350 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC188H7C350 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC188H7C350 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC188H7C350 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
CCDC188H7C350 HSD3BP3-201ENST00000514706 994 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 Y_RNA.667-201ENST00000516212 107 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 AP006245.2-201ENST00000522004 300 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC188H7C350 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CCDC188H7C350 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC188H7C350 AC009027.1-201ENST00000604510 479 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 AC016911.1-201ENST00000613297 452 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
CCDC188H7C350 AL158062.1-201ENST00000619632 745 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 AC015722.2-201ENST00000622210 551 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 OR8G3P-202ENST00000641572 1255 ntBASIC5.61□□□□□ -1.51
CCDC188H7C350 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC188H7C350 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC188H7C350 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCDC188H7C350 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC188H7C350 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC188H7C350 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC188H7C350 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC188H7C350 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC188H7C350 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC188H7C350 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC188H7C350 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC188H7C350 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms