Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RNU7-157P-201ENST00000459600 66 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AC104849.1-201ENST00000462623 405 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 RNA5SP392-201ENST00000516905 112 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AC139365.2-201ENST00000517972 253 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AC027308.1-201ENST00000517993 110 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AC005479.1-201ENST00000554629 451 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AP001823.1-201ENST00000604056 1003 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AL591167.1-201ENST00000607321 456 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AC023813.4-201ENST00000607580 580 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AC020634.1-201ENST00000608701 549 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AC074276.2-201ENST00000619891 348 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 MIR6811-201ENST00000620409 58 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 AC103858.2-201ENST00000621471 543 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 MIR8080-201ENST00000622224 89 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 OR11H2-202ENST00000641517 1085 ntBASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
CHKB-CPT1BH3BT56 IQCB2P-201ENST00000401788 1633 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 ALB-209ENST00000503124 1741 ntTSL 5 BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 AC009220.2-201ENST00000489759 1751 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 AC100757.1-201ENST00000616872 1835 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 A2MP1-204ENST00000566278 4130 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 ARHGAP42P1-201ENST00000507474 1976 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 OR9G4-201ENST00000302957 984 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 RN7SKP72-201ENST00000362327 292 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 RN7SKP77-201ENST00000363261 353 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 RN7SKP76-201ENST00000364419 323 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 RN7SKP124-201ENST00000364730 341 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 RNA5SP152-201ENST00000365184 110 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 MIR99A-201ENST00000384906 81 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 MIR195-201ENST00000385194 87 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 MIR130A-201ENST00000385274 89 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 SNORD96B-201ENST00000386148 79 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 FABP7P1-201ENST00000424004 391 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 RPS26P47-201ENST00000427219 348 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 MTCO1P51-201ENST00000427672 1060 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 BTG3P1-201ENST00000435859 716 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 AP000936.3-201ENST00000438127 255 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 MEG8-205ENST00000442197 625 ntTSL 2 BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 RPL6P24-201ENST00000445338 864 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 FABP3P2-201ENST00000453169 399 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 AC008620.1-201ENST00000468453 592 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 RPS10P28-201ENST00000480396 498 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 RN7SL817P-201ENST00000480777 288 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 RN7SL868P-201ENST00000485915 303 ntBASIC2.82□□□□□ -1.96
CHKB-CPT1BH3BT56 RPL9P15-201ENST00000491096 532 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms