Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 AC009784.1-201ENST00000426484 460 ntBASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 RPSAP41-201ENST00000439695 860 ntBASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 AC092647.3-201ENST00000443044 633 ntBASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 AP000797.2-201ENST00000475768 606 ntBASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 RPS24P16-201ENST00000497294 392 ntBASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 AC110775.1-201ENST00000513721 462 ntBASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 AC013701.1-201ENST00000522657 465 ntBASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 AC011626.1-201ENST00000604710 562 ntBASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 AL352984.2-202ENST00000613699 155 ntBASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 AC007786.3-201ENST00000615154 596 ntBASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 CASC19-281ENST00000642118 1554 ntBASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMIM28A0A1B0GU29 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 RN7SKP153-201ENST00000365026 316 ntBASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 SNORA70.6-201ENST00000383934 134 ntBASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 MIR589-201ENST00000385238 99 ntBASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 AL589647.1-201ENST00000402485 466 ntBASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 RN7SKP125-201ENST00000410481 302 ntBASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 RNU6-233P-201ENST00000410845 141 ntBASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 AL158827.1-201ENST00000416300 391 ntBASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 AL161722.2-201ENST00000434731 981 ntBASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 RPL12P3-201ENST00000440080 396 ntBASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 AC016772.1-201ENST00000444170 1261 ntBASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 AC231760.1-201ENST00000498002 260 ntBASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 AC004980.4-201ENST00000513375 203 ntBASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 RN7SKP147-201ENST00000517154 244 ntBASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 THAP12P4-201ENST00000528321 2266 ntBASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 MIR4646-201ENST00000580775 63 ntBASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SMIM28A0A1B0GU29 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 SNX18P3-202ENST00000565670 1750 ntBASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 AP002512.4-202ENST00000641599 4530 ntBASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 RN7SKP145-201ENST00000363291 303 ntBASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 RNU1-74P-201ENST00000384108 171 ntBASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 AL109941.1-201ENST00000401925 229 ntBASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 AL645733.1-201ENST00000402250 217 ntBASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 RPS27P18-201ENST00000431701 247 ntBASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 VN1R54P-201ENST00000435210 1049 ntBASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 AC002075.1-201ENST00000457396 676 ntBASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 AC108161.1-201ENST00000461060 402 ntBASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 RN7SL189P-201ENST00000468631 289 ntBASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 RPS12P31-201ENST00000491419 398 ntBASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 AC130364.2-201ENST00000528639 604 ntBASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 BNIP3P32-201ENST00000600015 554 ntBASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 AC024940.4-201ENST00000605507 246 ntBASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SMIM28A0A1B0GU29 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms