Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AP005403.1-201ENST00000579720 229 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 AC010487.1-201ENST00000594408 1172 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 AL589674.2-201ENST00000604304 337 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 AL139124.1-201ENST00000609123 421 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 AL118522.2-201ENST00000616045 615 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 OR8G7P-201ENST00000616658 848 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 MIR6886-201ENST00000619864 61 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 AL359715.3-201ENST00000569267 2123 ntBASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.21□□□□□ -1.58
ATG4BQ9Y4P1 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 AP005432.1-201ENST00000580891 3485 ntBASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 AC007342.9-201ENST00000623877 1385 ntBASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 MTCO1P11-201ENST00000429111 1528 ntBASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 AL360270.2-201ENST00000562952 5985 ntBASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 AC092681.1-201ENST00000297369 291 ntBASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 RNU4-2-201ENST00000365668 141 ntBASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 RFESDP1-201ENST00000422350 461 ntBASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 VTI1BP4-201ENST00000427516 527 ntBASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 AC023271.1-201ENST00000445936 1090 ntBASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 PSAT1P4-201ENST00000466500 526 ntBASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 AC079064.1-201ENST00000528365 362 ntBASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 EIF1AXP2-201ENST00000555940 413 ntBASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 MIR1273E-201ENST00000581165 102 ntBASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 OR7M1P-201ENST00000608946 533 ntBASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 MIR6133-201ENST00000617057 108 ntBASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 AC132068.1-201ENST00000623805 459 ntBASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 AC020633.1-201ENST00000468439 2247 ntBASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 AC016745.2-201ENST00000608834 3443 ntBASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 AC109446.4-201ENST00000623235 2755 ntBASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
ATG4BQ9Y4P1 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4BQ9Y4P1 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4BQ9Y4P1 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4BQ9Y4P1 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.19□□□□□ -1.58
ATG4BQ9Y4P1 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4BQ9Y4P1 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4BQ9Y4P1 AC107021.2-201ENST00000567714 2095 ntBASIC5.19□□□□□ -1.58
ATG4BQ9Y4P1 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
ATG4BQ9Y4P1 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.19□□□□□ -1.58
ATG4BQ9Y4P1 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
ATG4BQ9Y4P1 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
ATG4BQ9Y4P1 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.19□□□□□ -1.58
ATG4BQ9Y4P1 GABARAPL3-201ENST00000412799 354 ntBASIC5.19□□□□□ -1.58
ATG4BQ9Y4P1 AC234781.4-201ENST00000419384 244 ntBASIC5.19□□□□□ -1.58
ATG4BQ9Y4P1 AL354766.1-201ENST00000423396 542 ntBASIC5.19□□□□□ -1.58
ATG4BQ9Y4P1 MTCO1P51-201ENST00000427672 1060 ntBASIC5.19□□□□□ -1.58
ATG4BQ9Y4P1 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.19□□□□□ -1.58
ATG4BQ9Y4P1 AL359265.1-201ENST00000440296 795 ntBASIC5.19□□□□□ -1.58
ATG4BQ9Y4P1 AL390119.1-201ENST00000440329 312 ntBASIC5.19□□□□□ -1.58
ATG4BQ9Y4P1 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.19□□□□□ -1.58
ATG4BQ9Y4P1 AC091912.1-201ENST00000511351 248 ntBASIC5.19□□□□□ -1.58
ATG4BQ9Y4P1 RPL7L1P4-201ENST00000513004 707 ntBASIC5.19□□□□□ -1.58
ATG4BQ9Y4P1 AC020937.1-201ENST00000519677 1013 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms