Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AL136520.1-202ENST00000555494 763 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 AC044860.2-201ENST00000561005 179 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 AC234775.3-201ENST00000564612 656 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 ZNF92P2-201ENST00000600543 1059 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 SUGT1P3-202ENST00000604259 383 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 AL158050.2-201ENST00000605336 568 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 AC018690.1-201ENST00000608144 626 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 AC016597.2-201ENST00000613256 341 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 AP000484.1-201ENST00000620067 1252 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 AC009120.7-201ENST00000623452 780 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 AC090772.4-201ENST00000623599 362 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 CASC19-264ENST00000641912 1184 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 AC079776.5-201ENST00000641920 211 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 AL590763.1-201ENST00000398297 1545 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
EBF3Q9H4W6 AC020656.2-201ENST00000613291 5309 ntBASIC5.88□□□□□ -1.47
EBF3Q9H4W6 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 RNU6-925P-201ENST00000384629 104 ntBASIC5.87□□□□□ -1.47
EBF3Q9H4W6 MT-RNR1-201ENST00000389680 954 ntBASIC5.87□□□□□ -1.47
EBF3Q9H4W6 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 AC009804.1-201ENST00000400949 179 ntBASIC5.87□□□□□ -1.47
EBF3Q9H4W6 RSL24D1P1-201ENST00000404972 493 ntBASIC5.87□□□□□ -1.47
EBF3Q9H4W6 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 VTI1BP4-201ENST00000427516 527 ntBASIC5.87□□□□□ -1.47
EBF3Q9H4W6 AC099670.2-201ENST00000435130 321 ntBASIC5.87□□□□□ -1.47
EBF3Q9H4W6 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 MTCO3P43-201ENST00000440974 771 ntBASIC5.87□□□□□ -1.47
EBF3Q9H4W6 AL158053.1-201ENST00000441503 453 ntBASIC5.87□□□□□ -1.47
EBF3Q9H4W6 AL450023.1-201ENST00000450868 751 ntBASIC5.87□□□□□ -1.47
EBF3Q9H4W6 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 RPL32P9-201ENST00000487963 407 ntBASIC5.87□□□□□ -1.47
EBF3Q9H4W6 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 TPT1P8-201ENST00000510120 555 ntBASIC5.87□□□□□ -1.47
EBF3Q9H4W6 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 AC019322.1-201ENST00000571869 389 ntBASIC5.87□□□□□ -1.47
EBF3Q9H4W6 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 SETP3-201ENST00000581726 813 ntBASIC5.87□□□□□ -1.47
EBF3Q9H4W6 AC098483.2-201ENST00000603158 454 ntBASIC5.87□□□□□ -1.47
EBF3Q9H4W6 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 AC027449.1-201ENST00000608890 407 ntBASIC5.87□□□□□ -1.47
EBF3Q9H4W6 AL391834.1-201ENST00000609609 560 ntBASIC5.87□□□□□ -1.47
EBF3Q9H4W6 AL050303.3-201ENST00000613704 284 ntBASIC5.87□□□□□ -1.47
EBF3Q9H4W6 AC090607.5-201ENST00000615692 224 ntBASIC5.87□□□□□ -1.47
EBF3Q9H4W6 AC006249.1-201ENST00000621223 471 ntBASIC5.87□□□□□ -1.47
EBF3Q9H4W6 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 AC117409.1-201ENST00000470499 1310 ntBASIC5.87□□□□□ -1.47
EBF3Q9H4W6 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 AC099654.3-201ENST00000447087 1546 ntBASIC5.87□□□□□ -1.47
EBF3Q9H4W6 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
EBF3Q9H4W6 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 RN7SKP186-201ENST00000365371 303 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 SNORA5.1-201ENST00000384275 131 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 GAPDHP42-201ENST00000406848 981 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 GABARAPL3-201ENST00000412799 354 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 AC007394.1-201ENST00000421941 531 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 TRGV7-201ENST00000427089 353 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 AC019185.1-201ENST00000442718 389 ntBASIC5.86□□□□□ -1.47
EBF3Q9H4W6 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.86□□□□□ -1.47
EBF3Q9H4W6 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms