Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 DDX39BP2-208ENST00000453923 258 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 TPTE2P5-203ENST00000458118 728 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 RN7SL502P-201ENST00000481857 290 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AC009567.2-201ENST00000502989 349 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 RPS27AP18-201ENST00000515536 459 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 RN7SKP31-201ENST00000516354 278 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 SMARCE1P4-201ENST00000523647 241 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AC138915.2-201ENST00000569776 97 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AC017100.2-201ENST00000584628 355 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AC007255.2-201ENST00000604053 631 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AC245297.2-201ENST00000610119 565 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AC098679.5-201ENST00000624394 571 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 CASC19-232ENST00000641480 1244 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 OR2L1P-202ENST00000641567 1023 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AC034111.1-201ENST00000562143 3770 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 CR381670.1-201ENST00000624291 1693 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 AL021877.2-201ENST00000624442 10684 ntBASIC7.6□□□□□ -1.19
TRAIPQ9BWF2 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 MROH3P-201ENST00000435735 2676 ntBASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 SPATA31C2-201ENST00000324915 3777 ntBASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 Y_RNA.25-201ENST00000362528 102 ntBASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 AP000534.2-201ENST00000412729 568 ntBASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 AC006509.1-201ENST00000420788 634 ntBASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 RPL23AP15-201ENST00000450202 459 ntBASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 NF1P3-201ENST00000457709 450 ntBASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 AC006511.1-201ENST00000470614 315 ntBASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 AC005178.1-201ENST00000508392 440 ntBASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 RN7SKP96-201ENST00000516948 297 ntBASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 RNA5SP278-201ENST00000517055 102 ntBASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 MTCYBP28-201ENST00000566728 1132 ntBASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 MIR378C-201ENST00000578683 81 ntBASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC7.59□□□□□ -1.19
TRAIPQ9BWF2 AC129915.3-201ENST00000634128 948 ntBASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms