Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 EIF5AP4-201ENST00000441206 465 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 MTCO1P53-201ENST00000441633 699 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 TRIM60P11Y-201ENST00000445313 801 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 ZNF619P1-201ENST00000446539 752 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC126121.1-201ENST00000482313 553 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 PPP1R11P1-201ENST00000486095 376 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 RNU6-276P-201ENST00000516114 96 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC010376.1-201ENST00000522101 334 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC090888.3-201ENST00000558917 509 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC090826.1-203ENST00000569235 490 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC00556-201ENST00000569603 412 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 MIR4801-201ENST00000582704 82 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC095055.1-201ENST00000603472 1113 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 SNORA35B-201ENST00000607417 129 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AL136131.3-201ENST00000607600 188 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC104073.3-201ENST00000610942 955 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AL138960.1-201ENST00000613838 513 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AL096712.1-201ENST00000614561 159 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC006338.2-201ENST00000616864 791 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC105105.5-201ENST00000622635 1294 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC004232.3-201ENST00000622977 525 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 LINC00216-201ENST00000623548 1126 ntBASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CDK5RAP1Q96SZ6 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CDK5RAP1Q96SZ6 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CDK5RAP1Q96SZ6 AC012254.3-201ENST00000591183 2117 ntBASIC6.34□□□□□ -1.4
CDK5RAP1Q96SZ6 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.34□□□□□ -1.4
CDK5RAP1Q96SZ6 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CDK5RAP1Q96SZ6 RBPJP7-201ENST00000442803 1447 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 RBPJP5-201ENST00000449433 1447 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 SNORD116-9-201ENST00000384000 95 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 SNORD116-3-201ENST00000384287 95 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 SNORD116-7-201ENST00000384404 95 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 SNORD116-5-201ENST00000384462 95 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 RN7SKP97-201ENST00000410966 333 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 OR5M12P-201ENST00000423388 929 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 TRGV7-201ENST00000427089 353 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 KCTD9P1-201ENST00000430462 1167 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 RPL12P11-201ENST00000439970 501 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 CR769776.1-201ENST00000441254 787 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 OR10R1P-201ENST00000441524 1141 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 AC004022.1-201ENST00000447766 1066 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 AL445466.1-201ENST00000448432 357 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 NPM1P13-201ENST00000452663 865 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 AC073594.1-201ENST00000462065 364 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 NDUFA5P5-201ENST00000468361 342 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 RPS26P24-201ENST00000497656 331 ntBASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.33□□□□□ -1.4
CDK5RAP1Q96SZ6 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 159.6 ms