Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.42□□□□□ -1.54
PDLIM5Q96HC4 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 YES1P1-201ENST00000418510 1628 ntBASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 UGT2B26P-201ENST00000508672 1613 ntBASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 LINC02019-201ENST00000608605 2060 ntBASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 AP001029.2-203ENST00000589795 4910 ntBASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 AC104964.3-201ENST00000606115 2860 ntBASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 RNA5SP46-201ENST00000362370 120 ntBASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 RN7SKP69-201ENST00000365390 305 ntBASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 MIR7-1-201ENST00000384871 110 ntBASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 PEX12P1-201ENST00000400284 1048 ntBASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 ST13P16-201ENST00000401760 781 ntBASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 PPIAP9-201ENST00000403866 498 ntBASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 RPSAP35-201ENST00000413753 818 ntBASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 AC007064.3-201ENST00000422608 359 ntBASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 OR6D1P-201ENST00000436165 939 ntBASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 VDAC2P4-201ENST00000452925 711 ntBASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 RPS27AP18-201ENST00000515536 459 ntBASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 AC027243.2-201ENST00000602530 724 ntBASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 PPATP2-201ENST00000605635 508 ntBASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 BNIP3P7-201ENST00000605641 516 ntBASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 Z95327.3-201ENST00000610385 572 ntBASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 AC007683.2-201ENST00000624681 714 ntBASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PDLIM5Q96HC4 AC114786.1-201ENST00000512892 1415 ntBASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 AL121950.1-201ENST00000624993 2077 ntBASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 RN7SKP292-201ENST00000365522 317 ntBASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 SNORA70.6-201ENST00000383934 134 ntBASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 AC079809.1-201ENST00000415468 276 ntBASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 AL133173.1-201ENST00000423458 397 ntBASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 BX119321.1-201ENST00000428912 797 ntBASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 AL157884.3-201ENST00000448273 1184 ntBASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 AL133244.1-201ENST00000456007 258 ntBASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 NDUFA5P5-201ENST00000468361 342 ntBASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 MRPS21P7-201ENST00000566937 238 ntBASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 AC100767.2-201ENST00000604840 693 ntBASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 AL022394.1-201ENST00000606979 292 ntBASIC5.4□□□□□ -1.54
PDLIM5Q96HC4 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms