Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 AC017019.1-201ENST00000426129 261 ntBASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 HMGN2P27-201ENST00000427352 270 ntBASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 AL022331.1-201ENST00000429025 477 ntBASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 RN7SL72P-201ENST00000460697 269 ntBASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 GOLGA5P1-201ENST00000507317 980 ntBASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 AC016559.2-201ENST00000510759 359 ntBASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 RNA5SP438-201ENST00000516561 112 ntBASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 AP000648.1-201ENST00000529682 397 ntBASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 AC006518.1-201ENST00000541449 943 ntBASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 DPPA2P4-201ENST00000563717 878 ntBASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 AC090079.2-201ENST00000575289 768 ntBASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 AC067773.1-201ENST00000603284 1094 ntBASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 AL031601.1-201ENST00000605702 394 ntBASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 OR51C1P-201ENST00000608504 942 ntBASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 AL365181.4-201ENST00000609800 547 ntBASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 AC025574.2-201ENST00000615621 514 ntBASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 AL356752.1-201ENST00000615844 593 ntBASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 PROS2P-201ENST00000474651 1951 ntBASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 TCP11X1-202ENST00000622971 1372 ntBASIC5.54□□□□□ -1.52
SLC44A1Q8WWI5 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 TMSB4XP2-201ENST00000335179 210 ntBASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 RNU6-618P-201ENST00000363518 112 ntBASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 AL358178.1-201ENST00000407698 397 ntBASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 FAR1P1-201ENST00000427163 934 ntBASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 AL389925.1-201ENST00000432257 728 ntBASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 AL606490.8-201ENST00000441624 319 ntBASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 MORF4L1P4-201ENST00000450245 976 ntBASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 AC104849.1-201ENST00000462623 405 ntBASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 AC094085.1-201ENST00000468914 584 ntBASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 AC022215.1-201ENST00000481770 362 ntBASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 HMGN1P9-201ENST00000515212 298 ntBASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 RNU6-760P-201ENST00000516078 97 ntBASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 FTH1P11-201ENST00000517577 551 ntBASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 OR11H3P-201ENST00000554547 982 ntBASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 MTND4LP25-201ENST00000570218 163 ntBASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 MTCYBP13-201ENST00000578634 1093 ntBASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 AC092953.2-201ENST00000608000 699 ntBASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 AL356490.1-201ENST00000623079 479 ntBASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 AP001962.1-201ENST00000624114 559 ntBASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 AC135068.5-201ENST00000624197 983 ntBASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 FRG1EP-201ENST00000634469 770 ntBASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 AC073869.8-201ENST00000641806 335 ntBASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SLC44A1Q8WWI5 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms