Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 CDC42P3-201ENST00000518493 633 ntBASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 TOMM20P1-201ENST00000534518 427 ntBASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 AC079600.1-201ENST00000550326 297 ntBASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 AP001496.3-201ENST00000580230 913 ntBASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 AL365181.4-201ENST00000609800 547 ntBASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 uc_338.7-201ENST00000621834 124 ntBASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLHC1Q8NHS4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 AC107977.1-201ENST00000355745 939 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 RNU4-44P-201ENST00000363050 141 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 RN7SKP6-201ENST00000364795 319 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 OOSP1-201ENST00000398992 1270 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 VN1R12P-201ENST00000403778 876 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 SNORA11.5-201ENST00000408163 128 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 CDY17P-201ENST00000414121 1282 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 RPS3P2-201ENST00000421346 701 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 FMO7P-201ENST00000436045 768 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 HMGN1P2-201ENST00000445197 310 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 AL450023.1-201ENST00000450868 751 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 AC117394.1-201ENST00000477323 567 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 AC011411.1-201ENST00000509592 876 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 IGBP1P1-201ENST00000554337 1009 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 MIR4271-201ENST00000582451 67 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 AC012616.1-201ENST00000600294 197 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 AC079315.1-201ENST00000602952 623 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 AC108865.2-201ENST00000606881 432 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 AC244107.2-201ENST00000611773 76 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 AL096712.1-201ENST00000614561 159 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 AL118522.2-201ENST00000616045 615 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 AC003985.2-201ENST00000562268 1669 ntBASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLHC1Q8NHS4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 PCAT14-202ENST00000627127 3935 ntBASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 RN7SKP28-201ENST00000364770 305 ntBASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 SETP15-201ENST00000412724 337 ntBASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 RPL19P16-201ENST00000433839 588 ntBASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 SUMO2P3-201ENST00000438311 288 ntBASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 AC019185.1-201ENST00000442718 389 ntBASIC5.17□□□□□ -1.58
CLHC1Q8NHS4 AL450996.1-201ENST00000445574 1202 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms