Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 AL442128.2-201ENST00000620246 1824 ntBASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 SNORA70.6-201ENST00000383934 134 ntBASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 RNU1-149P-201ENST00000390870 161 ntBASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 AL121878.1-201ENST00000418638 859 ntBASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 FAM96AP1-201ENST00000430879 482 ntBASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 AC023271.1-201ENST00000445936 1090 ntBASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 GAPDHP14-201ENST00000450472 937 ntBASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 AC058823.1-201ENST00000485315 474 ntBASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 AC020937.1-201ENST00000519677 1013 ntBASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 YWHABP2-201ENST00000540201 713 ntBASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 AC090022.1-201ENST00000546569 311 ntBASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 AL049779.2-201ENST00000553847 315 ntBASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 AC027216.1-201ENST00000577726 685 ntBASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 AC010615.3-201ENST00000597319 394 ntBASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 AC108738.1-201ENST00000603703 237 ntBASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 NF1P10-201ENST00000613227 742 ntBASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 AC008115.4-201ENST00000619780 775 ntBASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 AC235565.1-201ENST00000456962 1325 ntBASIC4.97□□□□□ -1.61
C9orf40Q8IXQ3 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
C9orf40Q8IXQ3 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
C9orf40Q8IXQ3 OR55B1P-203ENST00000641518 2602 ntBASIC4.96□□□□□ -1.61
C9orf40Q8IXQ3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
C9orf40Q8IXQ3 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 U3.2-201ENST00000362981 210 ntBASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 RN7SKP145-201ENST00000363291 303 ntBASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 RNU6-171P-201ENST00000384354 107 ntBASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 RNA5SP187-201ENST00000384400 119 ntBASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 MIR1286-201ENST00000408112 78 ntBASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 UBE2V2P1-201ENST00000434717 398 ntBASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 TPTE2P1-204ENST00000435256 593 ntBASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 AL606490.1-201ENST00000452266 765 ntBASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 AC104634.1-201ENST00000452720 462 ntBASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 RPL7P39-201ENST00000481157 744 ntBASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 SCARNA21.2-201ENST00000516600 166 ntBASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 SEPT10P1-201ENST00000517342 1162 ntBASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 HMGN2P47-201ENST00000559378 272 ntBASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 NMNAT1P5-201ENST00000559657 841 ntBASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 AL512329.2-201ENST00000607350 548 ntBASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 AC007786.3-201ENST00000615154 596 ntBASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 AC138965.3-201ENST00000623875 498 ntBASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 CYP4F35P-202ENST00000636121 390 ntBASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
C9orf40Q8IXQ3 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms