Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AC106872.5-201ENST00000508856 1416 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 RNU6-670P-201ENST00000364312 104 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 U3.28-201ENST00000391249 210 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AL589655.1-201ENST00000405398 482 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AL009179.1-201ENST00000406085 265 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 RPS3AP2-201ENST00000407190 754 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 SLC20A1P1-201ENST00000413906 956 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AL512504.1-201ENST00000415494 778 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AL133482.1-201ENST00000415988 498 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AC073464.3-201ENST00000422564 712 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AL662874.1-201ENST00000426065 230 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 RPS27AP6-201ENST00000427962 448 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AC073508.1-201ENST00000428866 656 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 CLIC4P1-201ENST00000453177 535 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 NDUFA5P5-201ENST00000468361 342 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 RN7SL583P-201ENST00000475692 287 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AC087672.1-201ENST00000479876 766 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 PFN1P8-201ENST00000497012 543 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 RNU6-615P-201ENST00000516065 106 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 SEPT10P1-201ENST00000517342 1162 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 MTND2P38-201ENST00000522536 667 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 IGKV2-4-201ENST00000523070 340 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 OR4A17P-201ENST00000526032 904 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AC068339.2-201ENST00000534395 618 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AC079315.1-201ENST00000602952 623 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AL365181.4-201ENST00000609800 547 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AL356863.1-201ENST00000623378 1080 ntBASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ZNF549Q6P9A3 AC120036.2-201ENST00000509729 1474 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 OR4K17-201ENST00000315543 1032 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AF228730.1-201ENST00000397972 663 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 RMRPP5-201ENST00000411156 267 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 GTF2IP5-201ENST00000414608 731 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 NME1P1-201ENST00000420914 382 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 RIMKLBP2-201ENST00000424737 654 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 RPL7P56-201ENST00000429441 717 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 NPM1P18-201ENST00000434232 732 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AC005297.1-201ENST00000444765 862 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AC105233.1-201ENST00000498840 781 ntBASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.51□□□□□ -1.53
ZNF549Q6P9A3 AC021106.1-201ENST00000509020 1058 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms