Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.36□□□□□ -1.39
YBX1P67809 PARP4P1-201ENST00000435945 2337 ntBASIC6.36□□□□□ -1.39
YBX1P67809 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.36□□□□□ -1.39
YBX1P67809 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
YBX1P67809 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
YBX1P67809 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
YBX1P67809 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
YBX1P67809 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
YBX1P67809 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
YBX1P67809 NACA3P-201ENST00000359690 648 ntBASIC6.36□□□□□ -1.39
YBX1P67809 Y_RNA.88-201ENST00000363029 99 ntBASIC6.36□□□□□ -1.39
YBX1P67809 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
YBX1P67809 RN7SKP166-201ENST00000410812 305 ntBASIC6.36□□□□□ -1.39
YBX1P67809 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.36□□□□□ -1.39
YBX1P67809 EIF1P1-201ENST00000421436 341 ntBASIC6.36□□□□□ -1.39
YBX1P67809 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.36□□□□□ -1.39
YBX1P67809 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC6.36□□□□□ -1.39
YBX1P67809 RAC1P8-201ENST00000427086 527 ntBASIC6.36□□□□□ -1.39
YBX1P67809 USP9YP35-201ENST00000435696 412 ntBASIC6.36□□□□□ -1.39
YBX1P67809 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.36□□□□□ -1.39
YBX1P67809 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.36□□□□□ -1.39
YBX1P67809 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
YBX1P67809 AC015524.1-201ENST00000491585 472 ntBASIC6.36□□□□□ -1.39
YBX1P67809 RPS6P4-201ENST00000494693 758 ntBASIC6.36□□□□□ -1.39
YBX1P67809 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC6.36□□□□□ -1.39
YBX1P67809 AC090058.1-201ENST00000498788 435 ntBASIC6.36□□□□□ -1.39
YBX1P67809 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
YBX1P67809 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.36□□□□□ -1.39
YBX1P67809 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC6.36□□□□□ -1.39
YBX1P67809 RNA5SP318-201ENST00000516352 92 ntBASIC6.36□□□□□ -1.39
YBX1P67809 SEPT10P1-201ENST00000517342 1162 ntBASIC6.36□□□□□ -1.39
YBX1P67809 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.36□□□□□ -1.39
YBX1P67809 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.36□□□□□ -1.39
YBX1P67809 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
YBX1P67809 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
YBX1P67809 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC6.36□□□□□ -1.39
YBX1P67809 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.36□□□□□ -1.39
YBX1P67809 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
YBX1P67809 SERPINE4P-201ENST00000554978 281 ntBASIC6.36□□□□□ -1.39
YBX1P67809 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.36□□□□□ -1.39
YBX1P67809 AC106785.4-201ENST00000569492 412 ntBASIC6.36□□□□□ -1.39
YBX1P67809 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC6.36□□□□□ -1.39
YBX1P67809 MIR4301-201ENST00000577203 66 ntBASIC6.36□□□□□ -1.39
YBX1P67809 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.36□□□□□ -1.39
YBX1P67809 AC087683.1-201ENST00000591187 441 ntBASIC6.36□□□□□ -1.39
YBX1P67809 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC6.36□□□□□ -1.39
YBX1P67809 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.36□□□□□ -1.39
YBX1P67809 AC100767.2-201ENST00000604840 693 ntBASIC6.36□□□□□ -1.39
YBX1P67809 AL390877.1-201ENST00000605704 214 ntBASIC6.36□□□□□ -1.39
YBX1P67809 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.36□□□□□ -1.39
YBX1P67809 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.36□□□□□ -1.39
YBX1P67809 AC126118.1-201ENST00000607744 628 ntBASIC6.36□□□□□ -1.39
YBX1P67809 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
YBX1P67809 AC095031.1-201ENST00000623685 672 ntBASIC6.36□□□□□ -1.39
YBX1P67809 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.36□□□□□ -1.39
YBX1P67809 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.36□□□□□ -1.39
YBX1P67809 OR11H2-202ENST00000641517 1085 ntBASIC6.36□□□□□ -1.39
YBX1P67809 AC005332.9-201ENST00000620266 2921 ntBASIC6.36□□□□□ -1.39
YBX1P67809 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
YBX1P67809 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
YBX1P67809 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
YBX1P67809 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.36□□□□□ -1.39
YBX1P67809 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
YBX1P67809 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
YBX1P67809 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
YBX1P67809 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
YBX1P67809 AL078595.2-201ENST00000605309 1780 ntBASIC6.36□□□□□ -1.39
YBX1P67809 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
YBX1P67809 AC087359.1-201ENST00000508335 1740 ntBASIC6.36□□□□□ -1.39
YBX1P67809 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
YBX1P67809 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
YBX1P67809 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.35□□□□□ -1.39
YBX1P67809 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
YBX1P67809 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
YBX1P67809 AL359195.2-201ENST00000623657 4412 ntBASIC6.35□□□□□ -1.39
YBX1P67809 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
YBX1P67809 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.35□□□□□ -1.39
YBX1P67809 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
YBX1P67809 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
YBX1P67809 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
YBX1P67809 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
YBX1P67809 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.35□□□□□ -1.39
YBX1P67809 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
YBX1P67809 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.35□□□□□ -1.39
YBX1P67809 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.35□□□□□ -1.39
YBX1P67809 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
YBX1P67809 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
YBX1P67809 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
YBX1P67809 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
YBX1P67809 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
YBX1P67809 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
YBX1P67809 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC6.35□□□□□ -1.39
YBX1P67809 Y_RNA.248-201ENST00000364501 109 ntBASIC6.35□□□□□ -1.39
YBX1P67809 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
YBX1P67809 MIR191-201ENST00000384873 92 ntBASIC6.35□□□□□ -1.39
YBX1P67809 RNU6-932P-201ENST00000391108 106 ntBASIC6.35□□□□□ -1.39
YBX1P67809 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
YBX1P67809 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
YBX1P67809 XKRYP4-201ENST00000414395 483 ntBASIC6.35□□□□□ -1.39
YBX1P67809 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms