Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.41□□□□□ -1.22
MSH6P52701 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
MSH6P52701 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
MSH6P52701 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
MSH6P52701 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
MSH6P52701 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
MSH6P52701 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC7.4□□□□□ -1.22
MSH6P52701 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC7.4□□□□□ -1.22
MSH6P52701 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
MSH6P52701 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC7.4□□□□□ -1.22
MSH6P52701 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
MSH6P52701 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.4□□□□□ -1.22
MSH6P52701 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
MSH6P52701 AC092747.4-201ENST00000620519 1861 ntBASIC7.4□□□□□ -1.22
MSH6P52701 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.4□□□□□ -1.22
MSH6P52701 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
MSH6P52701 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
MSH6P52701 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
MSH6P52701 RPS26P38-201ENST00000414476 348 ntBASIC7.4□□□□□ -1.22
MSH6P52701 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC7.4□□□□□ -1.22
MSH6P52701 EI24P4-201ENST00000423683 1078 ntBASIC7.4□□□□□ -1.22
MSH6P52701 RSL24D1P6-201ENST00000426934 401 ntBASIC7.4□□□□□ -1.22
MSH6P52701 CNOT7P1-201ENST00000429006 852 ntBASIC7.4□□□□□ -1.22
MSH6P52701 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC7.4□□□□□ -1.22
MSH6P52701 RPL5P25-201ENST00000441148 775 ntBASIC7.4□□□□□ -1.22
MSH6P52701 ATP5A1P7-201ENST00000453978 1279 ntBASIC7.4□□□□□ -1.22
MSH6P52701 RPL7P40-201ENST00000481703 745 ntBASIC7.4□□□□□ -1.22
MSH6P52701 HMGN2P25-201ENST00000486956 268 ntBASIC7.4□□□□□ -1.22
MSH6P52701 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC7.4□□□□□ -1.22
MSH6P52701 AP001804.1-201ENST00000526868 919 ntBASIC7.4□□□□□ -1.22
MSH6P52701 DPPA3P2-201ENST00000553589 478 ntBASIC7.4□□□□□ -1.22
MSH6P52701 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC7.4□□□□□ -1.22
MSH6P52701 MIR3667-201ENST00000581025 74 ntBASIC7.4□□□□□ -1.22
MSH6P52701 AL162431.4-201ENST00000604674 411 ntBASIC7.4□□□□□ -1.22
MSH6P52701 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC7.4□□□□□ -1.22
MSH6P52701 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.4□□□□□ -1.22
MSH6P52701 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
MSH6P52701 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
MSH6P52701 AC006600.2-201ENST00000624834 2506 ntBASIC7.4□□□□□ -1.23
MSH6P52701 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
MSH6P52701 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
MSH6P52701 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
MSH6P52701 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
MSH6P52701 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MSH6P52701 EEF1A1P36-201ENST00000427807 1351 ntBASIC7.39□□□□□ -1.23
MSH6P52701 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.39□□□□□ -1.23
MSH6P52701 U3.3-201ENST00000362986 216 ntBASIC7.39□□□□□ -1.23
MSH6P52701 RNA5SP326-201ENST00000363209 110 ntBASIC7.39□□□□□ -1.23
MSH6P52701 RNA5SP332-201ENST00000391063 115 ntBASIC7.39□□□□□ -1.23
MSH6P52701 AL121977.1-201ENST00000401636 979 ntBASIC7.39□□□□□ -1.23
MSH6P52701 TRIM60P9Y-201ENST00000438459 816 ntBASIC7.39□□□□□ -1.23
MSH6P52701 TRIM60P11Y-201ENST00000445313 801 ntBASIC7.39□□□□□ -1.23
MSH6P52701 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC7.39□□□□□ -1.23
MSH6P52701 AP000797.2-201ENST00000475768 606 ntBASIC7.39□□□□□ -1.23
MSH6P52701 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC7.39□□□□□ -1.23
MSH6P52701 AC093720.1-201ENST00000505681 714 ntBASIC7.39□□□□□ -1.23
MSH6P52701 AC109464.1-201ENST00000511091 819 ntBASIC7.39□□□□□ -1.23
MSH6P52701 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC7.39□□□□□ -1.23
MSH6P52701 RN7SKP253-201ENST00000516424 309 ntBASIC7.39□□□□□ -1.23
MSH6P52701 SUMO2P19-201ENST00000518920 295 ntBASIC7.39□□□□□ -1.23
MSH6P52701 MRPS21P9-201ENST00000571150 257 ntBASIC7.39□□□□□ -1.23
MSH6P52701 MYLK-221ENST00000583087 678 ntTSL 4 BASIC7.39□□□□□ -1.23
MSH6P52701 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC7.39□□□□□ -1.23
MSH6P52701 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.39□□□□□ -1.23
MSH6P52701 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC7.39□□□□□ -1.23
MSH6P52701 AC006338.2-201ENST00000616864 791 ntBASIC7.39□□□□□ -1.23
MSH6P52701 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC7.39□□□□□ -1.23
MSH6P52701 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MSH6P52701 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC7.39□□□□□ -1.23
MSH6P52701 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
MSH6P52701 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
MSH6P52701 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
MSH6P52701 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
MSH6P52701 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
MSH6P52701 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
MSH6P52701 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
MSH6P52701 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
MSH6P52701 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.38□□□□□ -1.23
MSH6P52701 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
MSH6P52701 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
MSH6P52701 NPM1P36-201ENST00000415681 835 ntBASIC7.38□□□□□ -1.23
MSH6P52701 CRIP1P1-201ENST00000427567 185 ntBASIC7.38□□□□□ -1.23
MSH6P52701 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC7.38□□□□□ -1.23
MSH6P52701 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC7.38□□□□□ -1.23
MSH6P52701 AC006967.1-201ENST00000467608 589 ntBASIC7.38□□□□□ -1.23
MSH6P52701 RN7SL423P-201ENST00000486202 304 ntBASIC7.38□□□□□ -1.23
MSH6P52701 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
MSH6P52701 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC7.38□□□□□ -1.23
MSH6P52701 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC7.38□□□□□ -1.23
MSH6P52701 IGHVIII-76-1-201ENST00000523776 286 ntBASIC7.38□□□□□ -1.23
MSH6P52701 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC7.38□□□□□ -1.23
MSH6P52701 MEMO1P5-201ENST00000604810 406 ntBASIC7.38□□□□□ -1.23
MSH6P52701 HIRAP1-201ENST00000605318 787 ntBASIC7.38□□□□□ -1.23
MSH6P52701 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
MSH6P52701 ZNRD1ASP-221ENST00000637794 1074 ntBASIC7.38□□□□□ -1.23
MSH6P52701 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.38□□□□□ -1.23
MSH6P52701 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
MSH6P52701 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
MSH6P52701 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
MSH6P52701 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms