Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 RPL7L1P4-201ENST00000513004 707 ntBASIC5.78□□□□□ -1.48
CASP4P49662 ATP5LP3-201ENST00000514223 304 ntBASIC5.78□□□□□ -1.48
CASP4P49662 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.78□□□□□ -1.48
CASP4P49662 IGKV2-18-201ENST00000522607 343 ntBASIC5.78□□□□□ -1.48
CASP4P49662 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.78□□□□□ -1.48
CASP4P49662 AC027369.5-201ENST00000533838 755 ntBASIC5.78□□□□□ -1.48
CASP4P49662 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.78□□□□□ -1.48
CASP4P49662 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.78□□□□□ -1.48
CASP4P49662 MIR4489-201ENST00000578869 62 ntBASIC5.78□□□□□ -1.48
CASP4P49662 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.78□□□□□ -1.48
CASP4P49662 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.78□□□□□ -1.48
CASP4P49662 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.78□□□□□ -1.48
CASP4P49662 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.78□□□□□ -1.48
CASP4P49662 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CASP4P49662 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CASP4P49662 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CASP4P49662 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CASP4P49662 NLRP3P1-201ENST00000622303 1785 ntBASIC5.78□□□□□ -1.48
CASP4P49662 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
CASP4P49662 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
CASP4P49662 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CASP4P49662 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
CASP4P49662 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CASP4P49662 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CASP4P49662 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CASP4P49662 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CASP4P49662 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CASP4P49662 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.77□□□□□ -1.49
CASP4P49662 RNU1-19P-201ENST00000363306 165 ntBASIC5.77□□□□□ -1.49
CASP4P49662 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.77□□□□□ -1.49
CASP4P49662 MIR143-201ENST00000385300 106 ntBASIC5.77□□□□□ -1.49
CASP4P49662 RNU1-149P-201ENST00000390870 161 ntBASIC5.77□□□□□ -1.49
CASP4P49662 HSPA8P15-201ENST00000401676 786 ntBASIC5.77□□□□□ -1.49
CASP4P49662 AL391361.1-201ENST00000405580 489 ntBASIC5.77□□□□□ -1.49
CASP4P49662 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.77□□□□□ -1.49
CASP4P49662 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.77□□□□□ -1.49
CASP4P49662 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.77□□□□□ -1.49
CASP4P49662 AP000797.2-201ENST00000475768 606 ntBASIC5.77□□□□□ -1.49
CASP4P49662 RN7SL814P-201ENST00000487715 300 ntBASIC5.77□□□□□ -1.49
CASP4P49662 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.77□□□□□ -1.49
CASP4P49662 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.77□□□□□ -1.49
CASP4P49662 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.77□□□□□ -1.49
CASP4P49662 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CASP4P49662 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.77□□□□□ -1.49
CASP4P49662 NMNAT1P5-201ENST00000559657 841 ntBASIC5.77□□□□□ -1.49
CASP4P49662 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CASP4P49662 AC005252.1-201ENST00000604518 1063 ntBASIC5.77□□□□□ -1.49
CASP4P49662 AP000864.1-201ENST00000609424 650 ntBASIC5.77□□□□□ -1.49
CASP4P49662 MIR6839-201ENST00000620425 113 ntBASIC5.77□□□□□ -1.49
CASP4P49662 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.77□□□□□ -1.49
CASP4P49662 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CASP4P49662 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.77□□□□□ -1.49
CASP4P49662 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CASP4P49662 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.77□□□□□ -1.49
CASP4P49662 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CASP4P49662 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CASP4P49662 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CASP4P49662 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
CASP4P49662 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.77□□□□□ -1.49
CASP4P49662 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CASP4P49662 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CASP4P49662 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CASP4P49662 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
CASP4P49662 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CASP4P49662 RNA5SP183-201ENST00000362452 119 ntBASIC5.76□□□□□ -1.49
CASP4P49662 U3.2-201ENST00000362981 210 ntBASIC5.76□□□□□ -1.49
CASP4P49662 SNORA5.1-201ENST00000384275 131 ntBASIC5.76□□□□□ -1.49
CASP4P49662 MIR105-1-201ENST00000385222 81 ntBASIC5.76□□□□□ -1.49
CASP4P49662 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CASP4P49662 SPRYD7P1-201ENST00000443861 570 ntBASIC5.76□□□□□ -1.49
CASP4P49662 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.76□□□□□ -1.49
CASP4P49662 RPL7P6-201ENST00000480903 738 ntBASIC5.76□□□□□ -1.49
CASP4P49662 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.76□□□□□ -1.49
CASP4P49662 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.76□□□□□ -1.49
CASP4P49662 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.76□□□□□ -1.49
CASP4P49662 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CASP4P49662 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.76□□□□□ -1.49
CASP4P49662 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.76□□□□□ -1.49
CASP4P49662 AC127381.1-201ENST00000555979 939 ntBASIC5.76□□□□□ -1.49
CASP4P49662 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CASP4P49662 AC022467.1-201ENST00000614738 749 ntBASIC5.76□□□□□ -1.49
CASP4P49662 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.76□□□□□ -1.49
CASP4P49662 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.76□□□□□ -1.49
CASP4P49662 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CASP4P49662 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.76□□□□□ -1.49
CASP4P49662 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.76□□□□□ -1.49
CASP4P49662 AL592429.1-201ENST00000403909 1473 ntBASIC5.76□□□□□ -1.49
CASP4P49662 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CASP4P49662 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.76□□□□□ -1.49
CASP4P49662 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.75□□□□□ -1.49
CASP4P49662 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CASP4P49662 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CASP4P49662 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.75□□□□□ -1.49
CASP4P49662 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.75□□□□□ -1.49
CASP4P49662 AC020633.1-201ENST00000468439 2247 ntBASIC5.75□□□□□ -1.49
CASP4P49662 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CASP4P49662 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CASP4P49662 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CASP4P49662 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.75□□□□□ -1.49
CASP4P49662 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 265.3 ms