Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.01□□□□□ -1.61
LMX1BO60663 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.01□□□□□ -1.61
LMX1BO60663 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LMX1BO60663 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5□□□□□ -1.61
LMX1BO60663 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
LMX1BO60663 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5□□□□□ -1.61
LMX1BO60663 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5□□□□□ -1.61
LMX1BO60663 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
LMX1BO60663 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5□□□□□ -1.61
LMX1BO60663 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5□□□□□ -1.61
LMX1BO60663 RNU1-150P-201ENST00000362491 162 ntBASIC5□□□□□ -1.61
LMX1BO60663 SNORA63.3-201ENST00000362682 132 ntBASIC5□□□□□ -1.61
LMX1BO60663 RN7SKP185-201ENST00000362813 326 ntBASIC5□□□□□ -1.61
LMX1BO60663 RNA5SP326-201ENST00000363209 110 ntBASIC5□□□□□ -1.61
LMX1BO60663 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5□□□□□ -1.61
LMX1BO60663 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5□□□□□ -1.61
LMX1BO60663 AL353692.2-201ENST00000407054 335 ntBASIC5□□□□□ -1.61
LMX1BO60663 AC096921.1-201ENST00000411661 375 ntBASIC5□□□□□ -1.61
LMX1BO60663 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5□□□□□ -1.61
LMX1BO60663 OR13Z1P-201ENST00000416141 834 ntBASIC5□□□□□ -1.61
LMX1BO60663 VN1R37P-201ENST00000419096 748 ntBASIC5□□□□□ -1.61
LMX1BO60663 NME1P1-201ENST00000420914 382 ntBASIC5□□□□□ -1.61
LMX1BO60663 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5□□□□□ -1.61
LMX1BO60663 MTND4LP14-201ENST00000429447 288 ntBASIC5□□□□□ -1.61
LMX1BO60663 BX276092.6-201ENST00000430476 250 ntBASIC5□□□□□ -1.61
LMX1BO60663 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5□□□□□ -1.61
LMX1BO60663 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5□□□□□ -1.61
LMX1BO60663 MTND2P40-201ENST00000436718 841 ntBASIC5□□□□□ -1.61
LMX1BO60663 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5□□□□□ -1.61
LMX1BO60663 AL163193.1-201ENST00000444895 788 ntBASIC5□□□□□ -1.61
LMX1BO60663 BX276092.8-201ENST00000455722 250 ntBASIC5□□□□□ -1.61
LMX1BO60663 TRAV31-201ENST00000502780 342 ntBASIC5□□□□□ -1.61
LMX1BO60663 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5□□□□□ -1.61
LMX1BO60663 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5□□□□□ -1.61
LMX1BO60663 AC109481.1-201ENST00000509173 282 ntBASIC5□□□□□ -1.61
LMX1BO60663 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5□□□□□ -1.61
LMX1BO60663 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5□□□□□ -1.61
LMX1BO60663 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
LMX1BO60663 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5□□□□□ -1.61
LMX1BO60663 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5□□□□□ -1.61
LMX1BO60663 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5□□□□□ -1.61
LMX1BO60663 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5□□□□□ -1.61
LMX1BO60663 AL163952.1-202ENST00000569625 600 ntBASIC5□□□□□ -1.61
LMX1BO60663 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5□□□□□ -1.61
LMX1BO60663 AC015911.5-201ENST00000587076 451 ntBASIC5□□□□□ -1.61
LMX1BO60663 OR7E18P-201ENST00000592589 702 ntBASIC5□□□□□ -1.61
LMX1BO60663 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LMX1BO60663 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LMX1BO60663 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5□□□□□ -1.61
LMX1BO60663 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5□□□□□ -1.61
LMX1BO60663 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LMX1BO60663 AL163051.2-201ENST00000618976 735 ntBASIC5□□□□□ -1.61
LMX1BO60663 AP000770.2-201ENST00000623694 100 ntBASIC5□□□□□ -1.61
LMX1BO60663 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5□□□□□ -1.61
LMX1BO60663 AP001153.1-201ENST00000641024 338 ntBASIC5□□□□□ -1.61
LMX1BO60663 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
LMX1BO60663 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
LMX1BO60663 OR13C1P-202ENST00000641378 2919 ntBASIC5□□□□□ -1.61
LMX1BO60663 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5□□□□□ -1.61
LMX1BO60663 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
LMX1BO60663 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5□□□□□ -1.61
LMX1BO60663 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LMX1BO60663 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LMX1BO60663 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LMX1BO60663 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5□□□□□ -1.61
LMX1BO60663 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5□□□□□ -1.61
LMX1BO60663 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
LMX1BO60663 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
LMX1BO60663 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
LMX1BO60663 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LMX1BO60663 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LMX1BO60663 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LMX1BO60663 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LMX1BO60663 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.99□□□□□ -1.61
LMX1BO60663 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.99□□□□□ -1.61
LMX1BO60663 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LMX1BO60663 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
LMX1BO60663 AL449283.1-201ENST00000602631 3403 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 AC068870.1-201ENST00000563737 2455 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LMX1BO60663 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.99□□□□□ -1.61
LMX1BO60663 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC4.99□□□□□ -1.61
LMX1BO60663 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
LMX1BO60663 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LMX1BO60663 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LMX1BO60663 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LMX1BO60663 OR4K17-201ENST00000315543 1032 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.99□□□□□ -1.61
LMX1BO60663 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LMX1BO60663 RNA5SP514-201ENST00000363717 111 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.99□□□□□ -1.61
LMX1BO60663 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.99□□□□□ -1.61
LMX1BO60663 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.99□□□□□ -1.61
LMX1BO60663 RNU1-136P-201ENST00000384181 164 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 MIR105-2-201ENST00000385083 81 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LMX1BO60663 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
LMX1BO60663 RPL11P3-201ENST00000395256 523 ntBASIC4.99□□□□□ -1.61
LMX1BO60663 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.99□□□□□ -1.61
LMX1BO60663 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms