Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
FOXN3O00409 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
FOXN3O00409 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
FOXN3O00409 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
FOXN3O00409 AL355834.1-201ENST00000556602 3965 ntBASIC6.2□□□□□ -1.42
FOXN3O00409 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
FOXN3O00409 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
FOXN3O00409 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
FOXN3O00409 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
FOXN3O00409 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
FOXN3O00409 AC132825.1-201ENST00000463573 2247 ntBASIC6.19□□□□□ -1.42
FOXN3O00409 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.19□□□□□ -1.42
FOXN3O00409 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.19□□□□□ -1.42
FOXN3O00409 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXN3O00409 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
FOXN3O00409 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
FOXN3O00409 AL591135.1-201ENST00000401578 5914 ntBASIC6.19□□□□□ -1.42
FOXN3O00409 ZNF90P1-201ENST00000480493 1951 ntBASIC6.19□□□□□ -1.42
FOXN3O00409 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC6.19□□□□□ -1.42
FOXN3O00409 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC6.19□□□□□ -1.42
FOXN3O00409 CASC19-261ENST00000641853 1638 ntBASIC6.19□□□□□ -1.42
FOXN3O00409 SNORA72.3-201ENST00000365074 132 ntBASIC6.19□□□□□ -1.42
FOXN3O00409 RNU6-796P-201ENST00000391086 107 ntBASIC6.19□□□□□ -1.42
FOXN3O00409 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
FOXN3O00409 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
FOXN3O00409 SNORA79B-201ENST00000410557 148 ntBASIC6.19□□□□□ -1.42
FOXN3O00409 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.19□□□□□ -1.42
FOXN3O00409 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.19□□□□□ -1.42
FOXN3O00409 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.19□□□□□ -1.42
FOXN3O00409 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.19□□□□□ -1.42
FOXN3O00409 EIF5AP4-201ENST00000441206 465 ntBASIC6.19□□□□□ -1.42
FOXN3O00409 RBMY2TP-201ENST00000451162 947 ntBASIC6.19□□□□□ -1.42
FOXN3O00409 MTATP6P14-201ENST00000455189 673 ntBASIC6.19□□□□□ -1.42
FOXN3O00409 AL122020.1-201ENST00000472287 459 ntBASIC6.19□□□□□ -1.42
FOXN3O00409 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXN3O00409 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.19□□□□□ -1.42
FOXN3O00409 OR5H3P-201ENST00000502817 919 ntBASIC6.19□□□□□ -1.42
FOXN3O00409 GAPDHP71-201ENST00000511530 1003 ntBASIC6.19□□□□□ -1.42
FOXN3O00409 Y_RNA.667-201ENST00000516212 107 ntBASIC6.19□□□□□ -1.42
FOXN3O00409 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.19□□□□□ -1.42
FOXN3O00409 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXN3O00409 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.19□□□□□ -1.42
FOXN3O00409 AC096996.1-201ENST00000563813 325 ntBASIC6.19□□□□□ -1.42
FOXN3O00409 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.19□□□□□ -1.42
FOXN3O00409 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.19□□□□□ -1.42
FOXN3O00409 AC025857.2-201ENST00000602711 238 ntBASIC6.19□□□□□ -1.42
FOXN3O00409 RPAP2P1-201ENST00000603626 1168 ntBASIC6.19□□□□□ -1.42
FOXN3O00409 SUMO2P14-201ENST00000604488 293 ntBASIC6.19□□□□□ -1.42
FOXN3O00409 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
FOXN3O00409 AC024884.1-201ENST00000620583 399 ntBASIC6.19□□□□□ -1.42
FOXN3O00409 AC010608.3-201ENST00000625048 527 ntBASIC6.19□□□□□ -1.42
FOXN3O00409 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
FOXN3O00409 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC6.19□□□□□ -1.42
FOXN3O00409 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.19□□□□□ -1.42
FOXN3O00409 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.19□□□□□ -1.42
FOXN3O00409 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXN3O00409 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
FOXN3O00409 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
FOXN3O00409 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXN3O00409 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
FOXN3O00409 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXN3O00409 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXN3O00409 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXN3O00409 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXN3O00409 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
FOXN3O00409 PDZK1P1-202ENST00000425209 1350 ntBASIC6.18□□□□□ -1.42
FOXN3O00409 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXN3O00409 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXN3O00409 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
FOXN3O00409 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXN3O00409 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXN3O00409 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.18□□□□□ -1.42
FOXN3O00409 IFIT1P1-201ENST00000400497 1449 ntBASIC6.18□□□□□ -1.42
FOXN3O00409 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
FOXN3O00409 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXN3O00409 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
FOXN3O00409 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.18□□□□□ -1.42
FOXN3O00409 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
FOXN3O00409 AC239868.2-201ENST00000564237 4527 ntBASIC6.18□□□□□ -1.42
FOXN3O00409 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXN3O00409 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXN3O00409 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
FOXN3O00409 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
FOXN3O00409 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.18□□□□□ -1.42
FOXN3O00409 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXN3O00409 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXN3O00409 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
FOXN3O00409 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXN3O00409 AC004386.1-201ENST00000393214 761 ntBASIC6.18□□□□□ -1.42
FOXN3O00409 RPL11P3-201ENST00000395256 523 ntBASIC6.18□□□□□ -1.42
FOXN3O00409 AL357752.1-201ENST00000412817 349 ntBASIC6.18□□□□□ -1.42
FOXN3O00409 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXN3O00409 VN1R21P-201ENST00000426703 765 ntBASIC6.18□□□□□ -1.42
FOXN3O00409 BX323845.3-201ENST00000428215 527 ntBASIC6.18□□□□□ -1.42
FOXN3O00409 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXN3O00409 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXN3O00409 AC069154.1-201ENST00000432914 542 ntBASIC6.18□□□□□ -1.42
FOXN3O00409 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXN3O00409 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXN3O00409 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms