Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 RNA5SP500-201ENST00000364486 119 ntBASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 AL050305.1-201ENST00000399993 1230 ntBASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 AL391361.1-201ENST00000405580 489 ntBASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 AC069282.1-201ENST00000411911 526 ntBASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 MYL6P5-201ENST00000412707 459 ntBASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 AC099677.3-201ENST00000427081 395 ntBASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 AL022331.1-201ENST00000429025 477 ntBASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 AC011242.1-201ENST00000433596 1158 ntBASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 LYPLA1P1-201ENST00000434514 622 ntBASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 AC007000.2-201ENST00000442564 487 ntBASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 AC092106.1-201ENST00000444291 373 ntBASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 RPS27AP3-201ENST00000453803 454 ntBASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 MTATP6P14-201ENST00000455189 673 ntBASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 RPS17P15-201ENST00000475609 349 ntBASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 MIR4443-201ENST00000585052 53 ntBASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 AL512624.1-201ENST00000613638 469 ntBASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 AC097460.3-201ENST00000623099 442 ntBASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 AP003499.2-201ENST00000624100 483 ntBASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 AC007683.2-201ENST00000624681 714 ntBASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 AC083843.2-201ENST00000568248 6253 ntBASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 RN7SKP160-201ENST00000363804 340 ntBASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 RNA5SP132-201ENST00000364725 118 ntBASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 SNORD115-48-201ENST00000364764 76 ntBASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 PEX12P1-201ENST00000400284 1048 ntBASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 AL589994.1-201ENST00000404962 340 ntBASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 MTND4P24-201ENST00000424002 397 ntBASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 AC103563.5-201ENST00000455643 364 ntBASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 AC108729.2-201ENST00000476543 840 ntBASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 AC022215.1-201ENST00000481770 362 ntBASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 GTF2IP9-201ENST00000502460 301 ntBASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 TRAV31-201ENST00000502780 342 ntBASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 PCNAP1-201ENST00000505363 709 ntBASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 GOLGA5P1-201ENST00000507317 980 ntBASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 AC074087.1-201ENST00000512059 724 ntBASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 RNA5SP362-201ENST00000516048 118 ntBASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 AC027308.1-201ENST00000517993 110 ntBASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 TPM3P3-201ENST00000521343 354 ntBASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 ZNF92P2-201ENST00000600543 1059 ntBASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 AC013244.1-201ENST00000604279 193 ntBASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 AC087565.3-203ENST00000641018 837 ntBASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSX2IPQ9Y2D8 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms