Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SMG1P5-202ENST00000529428 4219 ntBASIC5.72□□□□□ -1.49
VRK1Q99986 SMG1P2-201ENST00000566127 4221 ntBASIC5.72□□□□□ -1.49
VRK1Q99986 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
VRK1Q99986 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.72□□□□□ -1.49
VRK1Q99986 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VRK1Q99986 AC092070.2-203ENST00000598377 3644 ntBASIC5.72□□□□□ -1.49
VRK1Q99986 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
VRK1Q99986 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
VRK1Q99986 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
VRK1Q99986 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.71□□□□□ -1.5
VRK1Q99986 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VRK1Q99986 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VRK1Q99986 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VRK1Q99986 RPL24P4-201ENST00000326586 421 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.71□□□□□ -1.5
VRK1Q99986 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
VRK1Q99986 RNA5SP350-201ENST00000363298 111 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 MIR137-201ENST00000385223 102 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 MIR320B1-201ENST00000390209 79 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 AC245036.1-201ENST00000391727 309 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
VRK1Q99986 AL590635.1-201ENST00000406314 586 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.71□□□□□ -1.5
VRK1Q99986 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.71□□□□□ -1.5
VRK1Q99986 AC027644.1-201ENST00000419595 298 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.71□□□□□ -1.5
VRK1Q99986 RPF2P1-201ENST00000424137 906 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.71□□□□□ -1.5
VRK1Q99986 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.71□□□□□ -1.5
VRK1Q99986 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.71□□□□□ -1.5
VRK1Q99986 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.71□□□□□ -1.5
VRK1Q99986 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.71□□□□□ -1.5
VRK1Q99986 AC092106.2-201ENST00000436597 487 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 CACYBPP1-201ENST00000438592 684 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.71□□□□□ -1.5
VRK1Q99986 DNAJA1P5-201ENST00000440278 943 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 GAPDHP37-201ENST00000442317 968 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.71□□□□□ -1.5
VRK1Q99986 CRYGGP-201ENST00000443337 145 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 AL139156.3-201ENST00000454802 394 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.71□□□□□ -1.5
VRK1Q99986 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.71□□□□□ -1.5
VRK1Q99986 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.71□□□□□ -1.5
VRK1Q99986 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.71□□□□□ -1.5
VRK1Q99986 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VRK1Q99986 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.71□□□□□ -1.5
VRK1Q99986 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VRK1Q99986 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.71□□□□□ -1.5
VRK1Q99986 AC021146.11-201ENST00000503319 491 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.71□□□□□ -1.5
VRK1Q99986 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.71□□□□□ -1.5
VRK1Q99986 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.71□□□□□ -1.5
VRK1Q99986 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.71□□□□□ -1.5
VRK1Q99986 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.71□□□□□ -1.5
VRK1Q99986 RN7SKP183-201ENST00000517169 324 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 AP001000.1-201ENST00000526843 742 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 OR4A2P-201ENST00000527276 913 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.71□□□□□ -1.5
VRK1Q99986 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.71□□□□□ -1.5
VRK1Q99986 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VRK1Q99986 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.71□□□□□ -1.5
VRK1Q99986 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.71□□□□□ -1.5
VRK1Q99986 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.71□□□□□ -1.5
VRK1Q99986 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.71□□□□□ -1.5
VRK1Q99986 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.71□□□□□ -1.5
VRK1Q99986 ZNF92P3-201ENST00000596594 954 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.71□□□□□ -1.5
VRK1Q99986 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.71□□□□□ -1.5
VRK1Q99986 AC124856.1-201ENST00000600819 896 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 AC012368.3-201ENST00000604190 219 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.71□□□□□ -1.5
VRK1Q99986 AC068726.1-201ENST00000610993 341 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 TCL6_3.1-201ENST00000619064 137 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.71□□□□□ -1.5
VRK1Q99986 AC061999.1-201ENST00000624454 177 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.71□□□□□ -1.5
VRK1Q99986 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VRK1Q99986 NSRP1P1-201ENST00000444067 1693 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
VRK1Q99986 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.71□□□□□ -1.5
VRK1Q99986 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.71□□□□□ -1.5
VRK1Q99986 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.71□□□□□ -1.5
VRK1Q99986 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
VRK1Q99986 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
VRK1Q99986 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VRK1Q99986 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.71□□□□□ -1.5
VRK1Q99986 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VRK1Q99986 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
VRK1Q99986 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.71□□□□□ -1.5
VRK1Q99986 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VRK1Q99986 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.71□□□□□ -1.5
VRK1Q99986 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VRK1Q99986 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VRK1Q99986 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VRK1Q99986 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VRK1Q99986 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.7□□□□□ -1.5
VRK1Q99986 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VRK1Q99986 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VRK1Q99986 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VRK1Q99986 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms