Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.55□□□□□ -1.52
C9orf72Q96LT7 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.55□□□□□ -1.52
C9orf72Q96LT7 MTCYBP13-201ENST00000578634 1093 ntBASIC5.55□□□□□ -1.52
C9orf72Q96LT7 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.55□□□□□ -1.52
C9orf72Q96LT7 PRPF19P1-201ENST00000584766 898 ntBASIC5.55□□□□□ -1.52
C9orf72Q96LT7 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.55□□□□□ -1.52
C9orf72Q96LT7 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
C9orf72Q96LT7 AC008833.1-201ENST00000611633 691 ntBASIC5.55□□□□□ -1.52
C9orf72Q96LT7 AL512624.1-201ENST00000613638 469 ntBASIC5.55□□□□□ -1.52
C9orf72Q96LT7 AC008115.3-201ENST00000614874 549 ntBASIC5.55□□□□□ -1.52
C9orf72Q96LT7 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.55□□□□□ -1.52
C9orf72Q96LT7 MIR6826-201ENST00000617808 98 ntBASIC5.55□□□□□ -1.52
C9orf72Q96LT7 AC091932.2-201ENST00000623014 291 ntBASIC5.55□□□□□ -1.52
C9orf72Q96LT7 AL390318.1-201ENST00000624564 687 ntBASIC5.55□□□□□ -1.52
C9orf72Q96LT7 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.55□□□□□ -1.52
C9orf72Q96LT7 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
C9orf72Q96LT7 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
C9orf72Q96LT7 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
C9orf72Q96LT7 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
C9orf72Q96LT7 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
C9orf72Q96LT7 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.55□□□□□ -1.52
C9orf72Q96LT7 ICE2P1-201ENST00000512800 1849 ntBASIC5.55□□□□□ -1.52
C9orf72Q96LT7 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
C9orf72Q96LT7 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
C9orf72Q96LT7 OR4G1P-202ENST00000641173 1788 ntBASIC5.55□□□□□ -1.52
C9orf72Q96LT7 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.55□□□□□ -1.52
C9orf72Q96LT7 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
C9orf72Q96LT7 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 RNA5SP132-201ENST00000364725 118 ntBASIC5.54□□□□□ -1.52
C9orf72Q96LT7 AL391361.1-201ENST00000405580 489 ntBASIC5.54□□□□□ -1.52
C9orf72Q96LT7 RPL12P9-201ENST00000412942 488 ntBASIC5.54□□□□□ -1.52
C9orf72Q96LT7 Z68694.1-201ENST00000413929 841 ntBASIC5.54□□□□□ -1.52
C9orf72Q96LT7 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 HSPD1P12-201ENST00000429127 1069 ntBASIC5.54□□□□□ -1.52
C9orf72Q96LT7 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 AC016772.1-201ENST00000444170 1261 ntBASIC5.54□□□□□ -1.52
C9orf72Q96LT7 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 PRPF38AP1-201ENST00000451976 933 ntBASIC5.54□□□□□ -1.52
C9orf72Q96LT7 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 AP000547.1-201ENST00000454360 617 ntBASIC5.54□□□□□ -1.52
C9orf72Q96LT7 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 AC016559.2-201ENST00000510759 359 ntBASIC5.54□□□□□ -1.52
C9orf72Q96LT7 AC020937.1-201ENST00000519677 1013 ntBASIC5.54□□□□□ -1.52
C9orf72Q96LT7 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 AC027369.5-201ENST00000533838 755 ntBASIC5.54□□□□□ -1.52
C9orf72Q96LT7 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 AC244107.2-201ENST00000611773 76 ntBASIC5.54□□□□□ -1.52
C9orf72Q96LT7 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.54□□□□□ -1.52
C9orf72Q96LT7 AC007683.2-201ENST00000624681 714 ntBASIC5.54□□□□□ -1.52
C9orf72Q96LT7 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 SRRM1P3-201ENST00000426911 2678 ntBASIC5.54□□□□□ -1.52
C9orf72Q96LT7 RARSP1-201ENST00000542842 1418 ntBASIC5.54□□□□□ -1.52
C9orf72Q96LT7 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.54□□□□□ -1.52
C9orf72Q96LT7 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.53□□□□□ -1.52
C9orf72Q96LT7 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
C9orf72Q96LT7 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
C9orf72Q96LT7 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.53□□□□□ -1.52
C9orf72Q96LT7 YES1P1-201ENST00000418510 1628 ntBASIC5.53□□□□□ -1.52
C9orf72Q96LT7 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.53□□□□□ -1.52
C9orf72Q96LT7 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
C9orf72Q96LT7 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
C9orf72Q96LT7 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
C9orf72Q96LT7 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
C9orf72Q96LT7 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.53□□□□□ -1.52
C9orf72Q96LT7 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
C9orf72Q96LT7 RN7SKP160-201ENST00000363804 340 ntBASIC5.53□□□□□ -1.52
C9orf72Q96LT7 AC007618.1-201ENST00000366455 732 ntBASIC5.53□□□□□ -1.52
C9orf72Q96LT7 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.53□□□□□ -1.52
C9orf72Q96LT7 OR6E1P-201ENST00000414424 923 ntBASIC5.53□□□□□ -1.52
C9orf72Q96LT7 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.53□□□□□ -1.52
C9orf72Q96LT7 MARK2P12-201ENST00000420129 585 ntBASIC5.53□□□□□ -1.52
C9orf72Q96LT7 TNPO1P1-201ENST00000423641 1138 ntBASIC5.53□□□□□ -1.52
C9orf72Q96LT7 AC113412.1-201ENST00000425840 504 ntBASIC5.53□□□□□ -1.52
C9orf72Q96LT7 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.53□□□□□ -1.52
C9orf72Q96LT7 AC092106.1-201ENST00000444291 373 ntBASIC5.53□□□□□ -1.52
C9orf72Q96LT7 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.53□□□□□ -1.52
C9orf72Q96LT7 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.53□□□□□ -1.52
C9orf72Q96LT7 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms