Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 SNORA77-201ENST00000408716 125 ntBASIC8.11□□□□□ -1.11
VPS8Q8N3P4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 AC004453.1-201ENST00000487895 408 ntBASIC8.11□□□□□ -1.11
VPS8Q8N3P4 RN7SL591P-201ENST00000496150 292 ntBASIC8.11□□□□□ -1.11
VPS8Q8N3P4 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 SCARNA9-201ENST00000530422 353 ntBASIC8.11□□□□□ -1.11
VPS8Q8N3P4 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
VPS8Q8N3P4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC8.1□□□□□ -1.11
VPS8Q8N3P4 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
VPS8Q8N3P4 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
VPS8Q8N3P4 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
VPS8Q8N3P4 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
VPS8Q8N3P4 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
VPS8Q8N3P4 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
VPS8Q8N3P4 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
VPS8Q8N3P4 FHIT-201ENST00000341848 174 ntTSL 3 BASIC8.1□□□□□ -1.11
VPS8Q8N3P4 MIR600-201ENST00000385007 98 ntBASIC8.1□□□□□ -1.11
VPS8Q8N3P4 RN7SKP16-201ENST00000410180 299 ntBASIC8.1□□□□□ -1.11
VPS8Q8N3P4 TRY2P-201ENST00000448860 689 ntBASIC8.1□□□□□ -1.11
VPS8Q8N3P4 AC105420.1-201ENST00000504389 582 ntBASIC8.1□□□□□ -1.11
VPS8Q8N3P4 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC8.1□□□□□ -1.11
VPS8Q8N3P4 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC8.1□□□□□ -1.11
VPS8Q8N3P4 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC8.1□□□□□ -1.11
VPS8Q8N3P4 MEMO1P5-201ENST00000604810 406 ntBASIC8.1□□□□□ -1.11
VPS8Q8N3P4 AC024940.4-201ENST00000605507 246 ntBASIC8.1□□□□□ -1.11
VPS8Q8N3P4 AC004948.1-201ENST00000609858 672 ntBASIC8.1□□□□□ -1.11
VPS8Q8N3P4 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC8.1□□□□□ -1.11
VPS8Q8N3P4 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
VPS8Q8N3P4 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.1□□□□□ -1.11
VPS8Q8N3P4 ALB-219ENST00000621085 1418 ntTSL 5 BASIC8.09□□□□□ -1.11
VPS8Q8N3P4 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
VPS8Q8N3P4 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC8.09□□□□□ -1.11
VPS8Q8N3P4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
VPS8Q8N3P4 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
VPS8Q8N3P4 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC8.09□□□□□ -1.11
VPS8Q8N3P4 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC8.09□□□□□ -1.11
VPS8Q8N3P4 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
VPS8Q8N3P4 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
VPS8Q8N3P4 GNAS-202ENST00000306090 477 ntTSL 5 BASIC8.09□□□□□ -1.11
VPS8Q8N3P4 RN7SKP95-201ENST00000362860 303 ntBASIC8.09□□□□□ -1.11
VPS8Q8N3P4 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
VPS8Q8N3P4 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC8.09□□□□□ -1.11
VPS8Q8N3P4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
VPS8Q8N3P4 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC8.09□□□□□ -1.11
VPS8Q8N3P4 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC8.09□□□□□ -1.11
VPS8Q8N3P4 AC093414.1-201ENST00000434712 514 ntBASIC8.09□□□□□ -1.11
VPS8Q8N3P4 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC8.09□□□□□ -1.11
VPS8Q8N3P4 RPS29P9-201ENST00000440360 171 ntBASIC8.09□□□□□ -1.11
VPS8Q8N3P4 AL354714.3-201ENST00000447284 493 ntBASIC8.09□□□□□ -1.11
VPS8Q8N3P4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC8.09□□□□□ -1.11
VPS8Q8N3P4 EIF4EBP2P1-201ENST00000450009 343 ntBASIC8.09□□□□□ -1.11
VPS8Q8N3P4 PRPF38AP1-201ENST00000451976 933 ntBASIC8.09□□□□□ -1.11
VPS8Q8N3P4 HIGD1AP8-201ENST00000453927 274 ntBASIC8.09□□□□□ -1.11
VPS8Q8N3P4 AC231760.1-201ENST00000498002 260 ntBASIC8.09□□□□□ -1.11
VPS8Q8N3P4 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
VPS8Q8N3P4 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
VPS8Q8N3P4 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
VPS8Q8N3P4 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
VPS8Q8N3P4 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
VPS8Q8N3P4 AC022884.2-201ENST00000578535 580 ntBASIC8.09□□□□□ -1.11
VPS8Q8N3P4 AC112694.2-201ENST00000623697 768 ntBASIC8.09□□□□□ -1.11
VPS8Q8N3P4 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
VPS8Q8N3P4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
VPS8Q8N3P4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VPS8Q8N3P4 RPL12P9-201ENST00000412942 488 ntBASIC8.08□□□□□ -1.12
VPS8Q8N3P4 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC8.08□□□□□ -1.12
VPS8Q8N3P4 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC8.08□□□□□ -1.12
VPS8Q8N3P4 BX842559.2-201ENST00000451418 605 ntBASIC8.08□□□□□ -1.12
VPS8Q8N3P4 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC8.08□□□□□ -1.12
VPS8Q8N3P4 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC8.08□□□□□ -1.12
VPS8Q8N3P4 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC8.08□□□□□ -1.12
VPS8Q8N3P4 RN7SKP147-201ENST00000517154 244 ntBASIC8.08□□□□□ -1.12
VPS8Q8N3P4 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC8.08□□□□□ -1.12
VPS8Q8N3P4 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC8.08□□□□□ -1.12
VPS8Q8N3P4 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC8.08□□□□□ -1.12
VPS8Q8N3P4 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC8.08□□□□□ -1.12
VPS8Q8N3P4 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC8.08□□□□□ -1.12
VPS8Q8N3P4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
VPS8Q8N3P4 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC8.08□□□□□ -1.12
VPS8Q8N3P4 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VPS8Q8N3P4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
VPS8Q8N3P4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC8.08□□□□□ -1.12
VPS8Q8N3P4 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
VPS8Q8N3P4 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
VPS8Q8N3P4 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
VPS8Q8N3P4 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC8.07□□□□□ -1.12
VPS8Q8N3P4 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC8.07□□□□□ -1.12
VPS8Q8N3P4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
VPS8Q8N3P4 U3.32-201ENST00000408116 212 ntBASIC8.07□□□□□ -1.12
VPS8Q8N3P4 RN7SKP125-201ENST00000410481 302 ntBASIC8.07□□□□□ -1.12
VPS8Q8N3P4 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC8.07□□□□□ -1.12
VPS8Q8N3P4 RPS26P13-201ENST00000419030 330 ntBASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 233.9 ms