Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 AC016583.1-201ENST00000624221 2431 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 SNORD56.4-201ENST00000363883 71 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 RNU4-40P-201ENST00000364351 143 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 RN7SKP257-201ENST00000364525 309 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 RNU6-906P-201ENST00000384700 70 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 SNORD94-201ENST00000386037 137 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 AL603865.2-201ENST00000401679 213 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 PTCD2P2-201ENST00000415579 1095 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 GPN3P1-201ENST00000423883 535 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 PNRC2P1-201ENST00000423940 420 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 AC112492.2-201ENST00000432774 1030 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 USP9YP24-201ENST00000434374 697 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 EMC3-AS1-205ENST00000438698 534 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 USP9YP17-201ENST00000444617 696 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 RPL5P13-201ENST00000462840 709 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 SNRPCP3-201ENST00000474888 476 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 RN7SL326P-201ENST00000477493 296 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 RPL12P31-201ENST00000478433 450 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 OR4D12P-201ENST00000509361 911 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 GAPDHP71-201ENST00000511530 1003 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 RNA5SP206-201ENST00000516703 121 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 UBTFL10-201ENST00000528532 562 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 AP001858.2-201ENST00000536213 601 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 AC037479.1-201ENST00000558361 625 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 AC027455.1-201ENST00000574104 594 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 AL589765.6-201ENST00000601909 549 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 SUMO2P14-201ENST00000604488 293 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 Z82195.1-201ENST00000604558 398 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 U91328.4-201ENST00000608919 517 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 AC011330.2-201ENST00000621680 635 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 AC005224.3-201ENST00000584683 2140 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 AC006484.1-201ENST00000435086 1884 ntBASIC5.54□□□□□ -1.52
PTCHD4Q6ZW05 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 AC024587.1-201ENST00000505925 2157 ntBASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 AL592429.1-201ENST00000403909 1473 ntBASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 SMG1P7-201ENST00000565246 2704 ntBASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 RNA5SP453-201ENST00000362503 119 ntBASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 RNU1-49P-201ENST00000363468 159 ntBASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 AL157702.1-201ENST00000398764 426 ntBASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 PSMD8P1-201ENST00000436275 769 ntBASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 WDR82P2-201ENST00000444540 928 ntBASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 AC092155.2-201ENST00000454675 477 ntBASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 AC008280.2-201ENST00000455473 307 ntBASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 RN7SL39P-201ENST00000462264 297 ntBASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 CCDC11P1-201ENST00000503137 1162 ntBASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 AC114324.2-202ENST00000503812 134 ntBASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 AC021106.1-201ENST00000509020 1058 ntBASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 AC147055.3-201ENST00000510547 851 ntBASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 AC097486.1-201ENST00000515331 210 ntBASIC5.53□□□□□ -1.52
PTCHD4Q6ZW05 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms