Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
LRRK2Q5S007 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.66□□□□□ -1.66
LRRK2Q5S007 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
LRRK2Q5S007 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LRRK2Q5S007 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LRRK2Q5S007 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LRRK2Q5S007 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
LRRK2Q5S007 AP002991.2-201ENST00000623807 2801 ntBASIC4.65□□□□□ -1.66
LRRK2Q5S007 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
LRRK2Q5S007 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
LRRK2Q5S007 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.65□□□□□ -1.66
LRRK2Q5S007 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
LRRK2Q5S007 CYP2AC1P-201ENST00000407830 1173 ntBASIC4.65□□□□□ -1.66
LRRK2Q5S007 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.65□□□□□ -1.66
LRRK2Q5S007 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.65□□□□□ -1.66
LRRK2Q5S007 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.65□□□□□ -1.66
LRRK2Q5S007 RHOT1P3-201ENST00000436571 331 ntBASIC4.65□□□□□ -1.66
LRRK2Q5S007 AL136455.1-201ENST00000441083 1240 ntBASIC4.65□□□□□ -1.66
LRRK2Q5S007 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.65□□□□□ -1.66
LRRK2Q5S007 AC109327.1-201ENST00000471666 403 ntBASIC4.65□□□□□ -1.66
LRRK2Q5S007 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.65□□□□□ -1.66
LRRK2Q5S007 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC4.65□□□□□ -1.66
LRRK2Q5S007 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.65□□□□□ -1.66
LRRK2Q5S007 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
LRRK2Q5S007 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
LRRK2Q5S007 AC013268.3-201ENST00000262716 2324 ntBASIC4.65□□□□□ -1.67
LRRK2Q5S007 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC4.65□□□□□ -1.67
LRRK2Q5S007 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
LRRK2Q5S007 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
LRRK2Q5S007 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LRRK2Q5S007 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.65□□□□□ -1.67
LRRK2Q5S007 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LRRK2Q5S007 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.65□□□□□ -1.67
LRRK2Q5S007 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
LRRK2Q5S007 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC4.65□□□□□ -1.67
LRRK2Q5S007 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC4.65□□□□□ -1.67
LRRK2Q5S007 AL353748.1-201ENST00000440753 474 ntBASIC4.65□□□□□ -1.67
LRRK2Q5S007 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.65□□□□□ -1.67
LRRK2Q5S007 AC104634.1-201ENST00000452720 462 ntBASIC4.65□□□□□ -1.67
LRRK2Q5S007 RN7SKP253-201ENST00000516424 309 ntBASIC4.65□□□□□ -1.67
LRRK2Q5S007 AC026688.1-201ENST00000520639 1168 ntBASIC4.65□□□□□ -1.67
LRRK2Q5S007 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.65□□□□□ -1.67
LRRK2Q5S007 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.65□□□□□ -1.67
LRRK2Q5S007 MIR4444-1-201ENST00000581696 74 ntBASIC4.65□□□□□ -1.67
LRRK2Q5S007 MIR4298-201ENST00000584380 73 ntBASIC4.65□□□□□ -1.67
LRRK2Q5S007 MIR4444-2-201ENST00000584390 74 ntBASIC4.65□□□□□ -1.67
LRRK2Q5S007 AC027334.1-201ENST00000603257 310 ntBASIC4.65□□□□□ -1.67
LRRK2Q5S007 AC079414.3-201ENST00000612986 1090 ntBASIC4.65□□□□□ -1.67
LRRK2Q5S007 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.65□□□□□ -1.67
LRRK2Q5S007 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRRK2Q5S007 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRRK2Q5S007 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LRRK2Q5S007 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LRRK2Q5S007 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRRK2Q5S007 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.64□□□□□ -1.67
LRRK2Q5S007 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 GAPDHP56-201ENST00000506031 988 ntBASIC4.64□□□□□ -1.67
LRRK2Q5S007 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 AC034229.5-201ENST00000624258 185 ntBASIC4.64□□□□□ -1.67
LRRK2Q5S007 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LRRK2Q5S007 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRRK2Q5S007 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRRK2Q5S007 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRRK2Q5S007 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRRK2Q5S007 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LRRK2Q5S007 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRRK2Q5S007 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRRK2Q5S007 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 AC008280.1-201ENST00000418851 412 ntBASIC4.64□□□□□ -1.67
LRRK2Q5S007 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 AC006967.1-201ENST00000467608 589 ntBASIC4.64□□□□□ -1.67
LRRK2Q5S007 NIP7P2-201ENST00000485801 544 ntBASIC4.64□□□□□ -1.67
LRRK2Q5S007 AC114876.1-201ENST00000490962 1366 ntBASIC4.64□□□□□ -1.67
LRRK2Q5S007 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRRK2Q5S007 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 AC084824.1-201ENST00000550917 1005 ntBASIC4.64□□□□□ -1.67
LRRK2Q5S007 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LRRK2Q5S007 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 AC116631.1-202ENST00000640984 683 ntBASIC4.64□□□□□ -1.67
LRRK2Q5S007 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC4.64□□□□□ -1.67
LRRK2Q5S007 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LRRK2Q5S007 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LRRK2Q5S007 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
LRRK2Q5S007 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms