Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.24□□□□□ -1.41
GABPAQ06546 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.24□□□□□ -1.41
GABPAQ06546 RPL12P3-201ENST00000440080 396 ntBASIC6.24□□□□□ -1.41
GABPAQ06546 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.24□□□□□ -1.41
GABPAQ06546 AC079168.1-201ENST00000458741 345 ntBASIC6.24□□□□□ -1.41
GABPAQ06546 PSAT1P4-201ENST00000466500 526 ntBASIC6.24□□□□□ -1.41
GABPAQ06546 RPL7P40-201ENST00000481703 745 ntBASIC6.24□□□□□ -1.41
GABPAQ06546 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.24□□□□□ -1.41
GABPAQ06546 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.24□□□□□ -1.41
GABPAQ06546 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.24□□□□□ -1.41
GABPAQ06546 SUMO2P19-201ENST00000518920 295 ntBASIC6.24□□□□□ -1.41
GABPAQ06546 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.24□□□□□ -1.41
GABPAQ06546 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.24□□□□□ -1.41
GABPAQ06546 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.24□□□□□ -1.41
GABPAQ06546 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
GABPAQ06546 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6.24□□□□□ -1.41
GABPAQ06546 AC093388.1-201ENST00000609166 430 ntBASIC6.24□□□□□ -1.41
GABPAQ06546 uc_338.7-201ENST00000621834 124 ntBASIC6.24□□□□□ -1.41
GABPAQ06546 AC009950.2-201ENST00000636548 183 ntBASIC6.24□□□□□ -1.41
GABPAQ06546 AL355488.2-201ENST00000609909 2850 ntBASIC6.24□□□□□ -1.41
GABPAQ06546 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.24□□□□□ -1.41
GABPAQ06546 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
GABPAQ06546 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
GABPAQ06546 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
GABPAQ06546 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.24□□□□□ -1.41
GABPAQ06546 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
GABPAQ06546 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
GABPAQ06546 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
GABPAQ06546 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.24□□□□□ -1.41
GABPAQ06546 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
GABPAQ06546 AP000547.3-204ENST00000588548 2523 ntBASIC6.23□□□□□ -1.41
GABPAQ06546 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
GABPAQ06546 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
GABPAQ06546 RN7SKP185-201ENST00000362813 326 ntBASIC6.23□□□□□ -1.41
GABPAQ06546 U3.28-201ENST00000391249 210 ntBASIC6.23□□□□□ -1.41
GABPAQ06546 MIR1182-201ENST00000408363 97 ntBASIC6.23□□□□□ -1.41
GABPAQ06546 RN7SKP126-201ENST00000411143 300 ntBASIC6.23□□□□□ -1.41
GABPAQ06546 RPS26P13-201ENST00000419030 330 ntBASIC6.23□□□□□ -1.41
GABPAQ06546 AL590762.4-201ENST00000425885 253 ntBASIC6.23□□□□□ -1.41
GABPAQ06546 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.23□□□□□ -1.41
GABPAQ06546 VN1R54P-201ENST00000435210 1049 ntBASIC6.23□□□□□ -1.41
GABPAQ06546 CEACAMP7-201ENST00000444105 496 ntBASIC6.23□□□□□ -1.41
GABPAQ06546 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.23□□□□□ -1.41
GABPAQ06546 RN7SL97P-201ENST00000486780 299 ntBASIC6.23□□□□□ -1.41
GABPAQ06546 GLUD1P3-202ENST00000508551 200 ntBASIC6.23□□□□□ -1.41
GABPAQ06546 SEPT10P1-201ENST00000517342 1162 ntBASIC6.23□□□□□ -1.41
GABPAQ06546 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.23□□□□□ -1.41
GABPAQ06546 AP006245.2-201ENST00000522004 300 ntBASIC6.23□□□□□ -1.41
GABPAQ06546 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
GABPAQ06546 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
GABPAQ06546 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
GABPAQ06546 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
GABPAQ06546 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.23□□□□□ -1.41
GABPAQ06546 AC008814.1-201ENST00000603797 406 ntBASIC6.23□□□□□ -1.41
GABPAQ06546 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GABPAQ06546 AC005618.4-201ENST00000625053 554 ntBASIC6.23□□□□□ -1.41
GABPAQ06546 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.23□□□□□ -1.41
GABPAQ06546 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.23□□□□□ -1.41
GABPAQ06546 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
GABPAQ06546 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GABPAQ06546 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.23□□□□□ -1.41
GABPAQ06546 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.23□□□□□ -1.41
GABPAQ06546 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
GABPAQ06546 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
GABPAQ06546 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
GABPAQ06546 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
GABPAQ06546 AC023421.1-201ENST00000590535 1785 ntBASIC6.22□□□□□ -1.41
GABPAQ06546 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
GABPAQ06546 AC053481.2-202ENST00000582394 1500 ntBASIC6.22□□□□□ -1.41
GABPAQ06546 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.22□□□□□ -1.41
GABPAQ06546 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.22□□□□□ -1.41
GABPAQ06546 HSPA8P15-201ENST00000401676 786 ntBASIC6.22□□□□□ -1.41
GABPAQ06546 AL589647.1-201ENST00000402485 466 ntBASIC6.22□□□□□ -1.41
GABPAQ06546 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.22□□□□□ -1.41
GABPAQ06546 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
GABPAQ06546 AC211486.3-201ENST00000412694 621 ntBASIC6.22□□□□□ -1.41
GABPAQ06546 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.22□□□□□ -1.41
GABPAQ06546 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.22□□□□□ -1.41
GABPAQ06546 RPL7P61-201ENST00000451721 751 ntBASIC6.22□□□□□ -1.41
GABPAQ06546 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.22□□□□□ -1.41
GABPAQ06546 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.22□□□□□ -1.41
GABPAQ06546 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.22□□□□□ -1.41
GABPAQ06546 AC013701.1-201ENST00000522657 465 ntBASIC6.22□□□□□ -1.41
GABPAQ06546 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC6.22□□□□□ -1.41
GABPAQ06546 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
GABPAQ06546 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.22□□□□□ -1.41
GABPAQ06546 AL162431.4-201ENST00000604674 411 ntBASIC6.22□□□□□ -1.41
GABPAQ06546 AP005131.7-201ENST00000610087 611 ntBASIC6.22□□□□□ -1.41
GABPAQ06546 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.22□□□□□ -1.41
GABPAQ06546 AC099654.6-201ENST00000636487 512 ntBASIC6.22□□□□□ -1.41
GABPAQ06546 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
GABPAQ06546 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
GABPAQ06546 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.22□□□□□ -1.41
GABPAQ06546 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
GABPAQ06546 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
GABPAQ06546 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.22□□□□□ -1.41
GABPAQ06546 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
GABPAQ06546 AC123912.3-201ENST00000600907 1367 ntBASIC6.21□□□□□ -1.41
GABPAQ06546 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.41
GABPAQ06546 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms