Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.32□□□□□ -1.56
CDKL1Q00532 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CDKL1Q00532 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDKL1Q00532 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDKL1Q00532 MTCO1P22-201ENST00000604619 1360 ntBASIC5.32□□□□□ -1.56
CDKL1Q00532 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.32□□□□□ -1.56
CDKL1Q00532 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDKL1Q00532 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDKL1Q00532 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDKL1Q00532 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDKL1Q00532 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDKL1Q00532 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDKL1Q00532 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDKL1Q00532 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.32□□□□□ -1.56
CDKL1Q00532 DBIP1-201ENST00000401435 260 ntBASIC5.32□□□□□ -1.56
CDKL1Q00532 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.32□□□□□ -1.56
CDKL1Q00532 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.32□□□□□ -1.56
CDKL1Q00532 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.32□□□□□ -1.56
CDKL1Q00532 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CDKL1Q00532 RPL12P18-201ENST00000437175 325 ntBASIC5.32□□□□□ -1.56
CDKL1Q00532 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.32□□□□□ -1.56
CDKL1Q00532 AC019185.1-201ENST00000442718 389 ntBASIC5.32□□□□□ -1.56
CDKL1Q00532 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.32□□□□□ -1.56
CDKL1Q00532 EEF1B2P6-201ENST00000445713 673 ntBASIC5.32□□□□□ -1.56
CDKL1Q00532 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.32□□□□□ -1.56
CDKL1Q00532 AL672138.1-201ENST00000450604 1015 ntBASIC5.32□□□□□ -1.56
CDKL1Q00532 OR52E3P-201ENST00000452083 936 ntBASIC5.32□□□□□ -1.56
CDKL1Q00532 OR52E7P-201ENST00000452394 933 ntBASIC5.32□□□□□ -1.56
CDKL1Q00532 RN7SL72P-201ENST00000460697 269 ntBASIC5.32□□□□□ -1.56
CDKL1Q00532 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDKL1Q00532 RPS24P16-201ENST00000497294 392 ntBASIC5.32□□□□□ -1.56
CDKL1Q00532 AC138409.2-202ENST00000507274 458 ntBASIC5.32□□□□□ -1.56
CDKL1Q00532 AC109464.1-201ENST00000511091 819 ntBASIC5.32□□□□□ -1.56
CDKL1Q00532 MTND6P2-201ENST00000512226 524 ntBASIC5.32□□□□□ -1.56
CDKL1Q00532 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.32□□□□□ -1.56
CDKL1Q00532 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.32□□□□□ -1.56
CDKL1Q00532 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.32□□□□□ -1.56
CDKL1Q00532 AC092709.1-201ENST00000521355 1045 ntBASIC5.32□□□□□ -1.56
CDKL1Q00532 OR11H3P-201ENST00000554547 982 ntBASIC5.32□□□□□ -1.56
CDKL1Q00532 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.32□□□□□ -1.56
CDKL1Q00532 RN7SL290P-201ENST00000578661 300 ntBASIC5.32□□□□□ -1.56
CDKL1Q00532 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.32□□□□□ -1.56
CDKL1Q00532 AC135068.5-201ENST00000624197 983 ntBASIC5.32□□□□□ -1.56
CDKL1Q00532 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.32□□□□□ -1.56
CDKL1Q00532 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDKL1Q00532 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDKL1Q00532 RNF19BPY-201ENST00000458209 1550 ntBASIC5.32□□□□□ -1.56
CDKL1Q00532 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.32□□□□□ -1.56
CDKL1Q00532 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.32□□□□□ -1.56
CDKL1Q00532 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDKL1Q00532 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.32□□□□□ -1.56
CDKL1Q00532 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.32□□□□□ -1.56
CDKL1Q00532 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDKL1Q00532 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDKL1Q00532 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDKL1Q00532 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDKL1Q00532 AC005261.6-201ENST00000623072 1387 ntBASIC5.31□□□□□ -1.56
CDKL1Q00532 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.31□□□□□ -1.56
CDKL1Q00532 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDKL1Q00532 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDKL1Q00532 GVINP1-202ENST00000531871 7271 ntBASIC5.31□□□□□ -1.56
CDKL1Q00532 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDKL1Q00532 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.31□□□□□ -1.56
CDKL1Q00532 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.31□□□□□ -1.56
CDKL1Q00532 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.31□□□□□ -1.56
CDKL1Q00532 RNA5SP241-201ENST00000391326 114 ntBASIC5.31□□□□□ -1.56
CDKL1Q00532 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CDKL1Q00532 DPPA2P2-201ENST00000418220 897 ntBASIC5.31□□□□□ -1.56
CDKL1Q00532 REREP1Y-201ENST00000422655 198 ntBASIC5.31□□□□□ -1.56
CDKL1Q00532 TNPO1P1-201ENST00000423641 1138 ntBASIC5.31□□□□□ -1.56
CDKL1Q00532 RPL7AP49-201ENST00000429522 581 ntBASIC5.31□□□□□ -1.56
CDKL1Q00532 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.31□□□□□ -1.56
CDKL1Q00532 AL591438.1-201ENST00000433508 581 ntBASIC5.31□□□□□ -1.56
CDKL1Q00532 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.31□□□□□ -1.56
CDKL1Q00532 REREP2Y-201ENST00000439103 200 ntBASIC5.31□□□□□ -1.56
CDKL1Q00532 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.31□□□□□ -1.56
CDKL1Q00532 AC064862.4-201ENST00000442180 334 ntBASIC5.31□□□□□ -1.56
CDKL1Q00532 AC073109.1-201ENST00000445066 978 ntBASIC5.31□□□□□ -1.56
CDKL1Q00532 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDKL1Q00532 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDKL1Q00532 HMGB3P14-201ENST00000494195 599 ntBASIC5.31□□□□□ -1.56
CDKL1Q00532 AC023424.1-201ENST00000496058 459 ntBASIC5.31□□□□□ -1.56
CDKL1Q00532 RPS26P24-201ENST00000497656 331 ntBASIC5.31□□□□□ -1.56
CDKL1Q00532 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.31□□□□□ -1.56
CDKL1Q00532 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.31□□□□□ -1.56
CDKL1Q00532 HMGB1P44-201ENST00000508597 572 ntBASIC5.31□□□□□ -1.56
CDKL1Q00532 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.31□□□□□ -1.56
CDKL1Q00532 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.31□□□□□ -1.56
CDKL1Q00532 AC074087.1-201ENST00000512059 724 ntBASIC5.31□□□□□ -1.56
CDKL1Q00532 TMEM97P2-201ENST00000517841 403 ntBASIC5.31□□□□□ -1.56
CDKL1Q00532 AC025423.2-201ENST00000537570 439 ntBASIC5.31□□□□□ -1.56
CDKL1Q00532 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.31□□□□□ -1.56
CDKL1Q00532 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.31□□□□□ -1.56
CDKL1Q00532 AP005403.1-201ENST00000579720 229 ntBASIC5.31□□□□□ -1.56
CDKL1Q00532 RN7SL356P-201ENST00000582228 248 ntBASIC5.31□□□□□ -1.56
CDKL1Q00532 MIR4505-201ENST00000582238 73 ntBASIC5.31□□□□□ -1.56
CDKL1Q00532 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.31□□□□□ -1.56
CDKL1Q00532 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.31□□□□□ -1.56
CDKL1Q00532 AC109583.2-201ENST00000617367 129 ntBASIC5.31□□□□□ -1.56
CDKL1Q00532 MIR6778-201ENST00000617912 73 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms