Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
TPM4P67936 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TPM4P67936 AC019072.1-201ENST00000604535 1551 ntBASIC5.94□□□□□ -1.46
TPM4P67936 AC011447.7-201ENST00000624228 1590 ntBASIC5.94□□□□□ -1.46
TPM4P67936 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
TPM4P67936 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TPM4P67936 RNA5SP477-201ENST00000362639 119 ntBASIC5.94□□□□□ -1.46
TPM4P67936 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.94□□□□□ -1.46
TPM4P67936 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.94□□□□□ -1.46
TPM4P67936 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.94□□□□□ -1.46
TPM4P67936 AMYP1-201ENST00000440059 1023 ntBASIC5.94□□□□□ -1.46
TPM4P67936 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.94□□□□□ -1.46
TPM4P67936 CBX1P5-201ENST00000475330 559 ntBASIC5.94□□□□□ -1.46
TPM4P67936 RN7SL346P-201ENST00000491561 294 ntBASIC5.94□□□□□ -1.46
TPM4P67936 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
TPM4P67936 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.94□□□□□ -1.46
TPM4P67936 MRPS21P7-201ENST00000566937 238 ntBASIC5.94□□□□□ -1.46
TPM4P67936 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.94□□□□□ -1.46
TPM4P67936 MIR6737-201ENST00000617385 70 ntBASIC5.94□□□□□ -1.46
TPM4P67936 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TPM4P67936 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.94□□□□□ -1.46
TPM4P67936 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TPM4P67936 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TPM4P67936 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
TPM4P67936 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.94□□□□□ -1.46
TPM4P67936 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.94□□□□□ -1.46
TPM4P67936 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TPM4P67936 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TPM4P67936 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
TPM4P67936 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.93□□□□□ -1.46
TPM4P67936 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.93□□□□□ -1.46
TPM4P67936 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
TPM4P67936 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.93□□□□□ -1.46
TPM4P67936 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.93□□□□□ -1.46
TPM4P67936 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
TPM4P67936 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.93□□□□□ -1.46
TPM4P67936 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TPM4P67936 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.93□□□□□ -1.46
TPM4P67936 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TPM4P67936 AC127526.2-201ENST00000426436 775 ntBASIC5.93□□□□□ -1.46
TPM4P67936 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.93□□□□□ -1.46
TPM4P67936 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.93□□□□□ -1.46
TPM4P67936 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.93□□□□□ -1.46
TPM4P67936 AC079168.1-201ENST00000458741 345 ntBASIC5.93□□□□□ -1.46
TPM4P67936 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.93□□□□□ -1.46
TPM4P67936 RPS23P6-201ENST00000466136 431 ntBASIC5.93□□□□□ -1.46
TPM4P67936 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.93□□□□□ -1.46
TPM4P67936 BTG1P1-201ENST00000540396 508 ntBASIC5.93□□□□□ -1.46
TPM4P67936 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.93□□□□□ -1.46
TPM4P67936 AC005341.1-201ENST00000571086 708 ntBASIC5.93□□□□□ -1.46
TPM4P67936 AC233702.9-201ENST00000581528 203 ntBASIC5.93□□□□□ -1.46
TPM4P67936 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.93□□□□□ -1.46
TPM4P67936 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.93□□□□□ -1.46
TPM4P67936 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.93□□□□□ -1.46
TPM4P67936 AC008691.1-209ENST00000642094 814 ntBASIC5.93□□□□□ -1.46
TPM4P67936 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.93□□□□□ -1.46
TPM4P67936 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
TPM4P67936 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TPM4P67936 AC100778.3-201ENST00000580060 1750 ntBASIC5.93□□□□□ -1.46
TPM4P67936 AP005432.1-201ENST00000580891 3485 ntBASIC5.93□□□□□ -1.46
TPM4P67936 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.93□□□□□ -1.46
TPM4P67936 NR1H5P-201ENST00000452683 1377 ntBASIC5.93□□□□□ -1.46
TPM4P67936 SRRM1P3-201ENST00000426911 2678 ntBASIC5.92□□□□□ -1.46
TPM4P67936 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
TPM4P67936 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
TPM4P67936 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.92□□□□□ -1.46
TPM4P67936 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.92□□□□□ -1.46
TPM4P67936 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
TPM4P67936 SUGT1P2-201ENST00000379452 992 ntBASIC5.92□□□□□ -1.46
TPM4P67936 HSPA8P15-201ENST00000401676 786 ntBASIC5.92□□□□□ -1.46
TPM4P67936 RPS3AP2-201ENST00000407190 754 ntBASIC5.92□□□□□ -1.46
TPM4P67936 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.92□□□□□ -1.46
TPM4P67936 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.92□□□□□ -1.46
TPM4P67936 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.92□□□□□ -1.46
TPM4P67936 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.92□□□□□ -1.46
TPM4P67936 AL512637.1-201ENST00000439523 1231 ntBASIC5.92□□□□□ -1.46
TPM4P67936 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.92□□□□□ -1.46
TPM4P67936 AC005297.1-201ENST00000444765 862 ntBASIC5.92□□□□□ -1.46
TPM4P67936 TIMM8BP2-201ENST00000445940 251 ntBASIC5.92□□□□□ -1.46
TPM4P67936 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.92□□□□□ -1.46
TPM4P67936 RN7SL814P-201ENST00000487715 300 ntBASIC5.92□□□□□ -1.46
TPM4P67936 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.92□□□□□ -1.46
TPM4P67936 AC025458.1-201ENST00000506046 166 ntBASIC5.92□□□□□ -1.46
TPM4P67936 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.92□□□□□ -1.46
TPM4P67936 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.92□□□□□ -1.46
TPM4P67936 RN7SKP99-201ENST00000517028 307 ntBASIC5.92□□□□□ -1.46
TPM4P67936 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.92□□□□□ -1.46
TPM4P67936 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.92□□□□□ -1.46
TPM4P67936 BNIP3P1-201ENST00000547295 580 ntBASIC5.92□□□□□ -1.46
TPM4P67936 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.92□□□□□ -1.46
TPM4P67936 AC092121.1-201ENST00000569452 202 ntBASIC5.92□□□□□ -1.46
TPM4P67936 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.92□□□□□ -1.46
TPM4P67936 AC012616.1-201ENST00000600294 197 ntBASIC5.92□□□□□ -1.46
TPM4P67936 AC009597.2-201ENST00000604659 592 ntBASIC5.92□□□□□ -1.46
TPM4P67936 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
TPM4P67936 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
TPM4P67936 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.92□□□□□ -1.46
TPM4P67936 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TPM4P67936 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
TPM4P67936 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms