Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN6P56747 AL360012.1-201ENST00000602813 131 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 AC093388.1-201ENST00000609166 430 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 AL031658.2-201ENST00000616850 651 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN6P56747 AL353662.3-201ENST00000625131 237 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN6P56747 AC239868.2-201ENST00000564237 4527 ntBASIC5.27□□□□□ -1.57
CLDN6P56747 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN6P56747 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN6P56747 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
CLDN6P56747 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN6P56747 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
CLDN6P56747 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN6P56747 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.26□□□□□ -1.57
CLDN6P56747 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.26□□□□□ -1.57
CLDN6P56747 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CLDN6P56747 KYNUP3-201ENST00000574386 1341 ntBASIC5.26□□□□□ -1.57
CLDN6P56747 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN6P56747 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN6P56747 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN6P56747 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN6P56747 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN6P56747 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.26□□□□□ -1.57
CLDN6P56747 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN6P56747 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN6P56747 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CLDN6P56747 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN6P56747 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.26□□□□□ -1.57
CLDN6P56747 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.26□□□□□ -1.57
CLDN6P56747 AL590399.2-201ENST00000427536 309 ntBASIC5.26□□□□□ -1.57
CLDN6P56747 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN6P56747 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN6P56747 AC073410.1-201ENST00000435125 589 ntBASIC5.26□□□□□ -1.57
CLDN6P56747 AC096775.1-201ENST00000437724 448 ntBASIC5.26□□□□□ -1.57
CLDN6P56747 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN6P56747 AC009127.1-201ENST00000467090 155 ntBASIC5.26□□□□□ -1.57
CLDN6P56747 AC135999.1-201ENST00000478962 479 ntBASIC5.26□□□□□ -1.57
CLDN6P56747 RPL7P6-201ENST00000480903 738 ntBASIC5.26□□□□□ -1.57
CLDN6P56747 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.26□□□□□ -1.57
CLDN6P56747 TOMM22P4-201ENST00000511318 336 ntBASIC5.26□□□□□ -1.57
CLDN6P56747 AL671862.1-201ENST00000515851 349 ntBASIC5.26□□□□□ -1.57
CLDN6P56747 AC013701.1-201ENST00000522657 465 ntBASIC5.26□□□□□ -1.57
CLDN6P56747 BRD9P1-201ENST00000529855 560 ntBASIC5.26□□□□□ -1.57
CLDN6P56747 AC137768.1-201ENST00000549998 553 ntBASIC5.26□□□□□ -1.57
CLDN6P56747 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.26□□□□□ -1.57
CLDN6P56747 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.26□□□□□ -1.57
CLDN6P56747 MIR4311-201ENST00000580794 100 ntBASIC5.26□□□□□ -1.57
CLDN6P56747 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.26□□□□□ -1.57
CLDN6P56747 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.26□□□□□ -1.57
CLDN6P56747 AL355974.3-201ENST00000617383 467 ntBASIC5.26□□□□□ -1.57
CLDN6P56747 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN6P56747 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CLDN6P56747 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
CLDN6P56747 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN6P56747 AC012078.1-201ENST00000405035 1646 ntBASIC5.26□□□□□ -1.57
CLDN6P56747 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.26□□□□□ -1.57
CLDN6P56747 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN6P56747 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN6P56747 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
CLDN6P56747 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CLDN6P56747 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
CLDN6P56747 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN6P56747 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN6P56747 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.25□□□□□ -1.57
CLDN6P56747 AL137141.1-201ENST00000624622 4836 ntBASIC5.25□□□□□ -1.57
CLDN6P56747 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN6P56747 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN6P56747 OR55B1P-203ENST00000641518 2602 ntBASIC5.25□□□□□ -1.57
CLDN6P56747 RNA5SP326-201ENST00000363209 110 ntBASIC5.25□□□□□ -1.57
CLDN6P56747 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.25□□□□□ -1.57
CLDN6P56747 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.25□□□□□ -1.57
CLDN6P56747 RN7SKP17-201ENST00000411242 351 ntBASIC5.25□□□□□ -1.57
CLDN6P56747 FAR2P2-201ENST00000413041 594 ntBASIC5.25□□□□□ -1.57
CLDN6P56747 FAR2P4-202ENST00000425399 584 ntBASIC5.25□□□□□ -1.57
CLDN6P56747 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.25□□□□□ -1.57
CLDN6P56747 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN6P56747 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.25□□□□□ -1.57
CLDN6P56747 AC008897.1-201ENST00000494006 347 ntBASIC5.25□□□□□ -1.57
CLDN6P56747 RN7SL591P-201ENST00000496150 292 ntBASIC5.25□□□□□ -1.57
CLDN6P56747 AC093890.1-201ENST00000502554 540 ntBASIC5.25□□□□□ -1.57
CLDN6P56747 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.25□□□□□ -1.57
CLDN6P56747 RNU6-1334P-201ENST00000516032 105 ntBASIC5.25□□□□□ -1.57
CLDN6P56747 OR5AZ1P-201ENST00000527448 943 ntBASIC5.25□□□□□ -1.57
CLDN6P56747 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.25□□□□□ -1.57
CLDN6P56747 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.25□□□□□ -1.57
CLDN6P56747 AC126615.2-201ENST00000553003 515 ntBASIC5.25□□□□□ -1.57
CLDN6P56747 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.25□□□□□ -1.57
CLDN6P56747 AC005224.3-201ENST00000584683 2140 ntBASIC5.25□□□□□ -1.57
CLDN6P56747 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.25□□□□□ -1.57
CLDN6P56747 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.25□□□□□ -1.57
CLDN6P56747 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.25□□□□□ -1.57
CLDN6P56747 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN6P56747 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN6P56747 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CLDN6P56747 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CLDN6P56747 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN6P56747 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN6P56747 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CLDN6P56747 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms