Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SELENOWP1-201ENST00000322792 252 ntBASIC5.17□□□□□ -1.58
CDH11P55287 MIR323A-201ENST00000362199 86 ntBASIC5.17□□□□□ -1.58
CDH11P55287 RNU6-697P-201ENST00000363348 107 ntBASIC5.17□□□□□ -1.58
CDH11P55287 RN7SKP81-201ENST00000365603 331 ntBASIC5.17□□□□□ -1.58
CDH11P55287 AMZ2P2-201ENST00000406819 1057 ntBASIC5.17□□□□□ -1.58
CDH11P55287 UBE2V1P15-201ENST00000407776 448 ntBASIC5.17□□□□□ -1.58
CDH11P55287 AC245060.4-201ENST00000413293 1121 ntBASIC5.17□□□□□ -1.58
CDH11P55287 AL354890.1-201ENST00000413730 346 ntBASIC5.17□□□□□ -1.58
CDH11P55287 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH11P55287 AL133482.1-201ENST00000415988 498 ntBASIC5.17□□□□□ -1.58
CDH11P55287 VN1R31P-201ENST00000417498 730 ntBASIC5.17□□□□□ -1.58
CDH11P55287 AC013470.3-201ENST00000420252 1194 ntBASIC5.17□□□□□ -1.58
CDH11P55287 MGAT2P2-201ENST00000427194 797 ntBASIC5.17□□□□□ -1.58
CDH11P55287 BX323845.3-201ENST00000428215 527 ntBASIC5.17□□□□□ -1.58
CDH11P55287 DEFA9P-201ENST00000433042 285 ntBASIC5.17□□□□□ -1.58
CDH11P55287 VN1R110P-201ENST00000438988 971 ntBASIC5.17□□□□□ -1.58
CDH11P55287 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH11P55287 AL359265.1-201ENST00000440296 795 ntBASIC5.17□□□□□ -1.58
CDH11P55287 BMS1P10-201ENST00000443754 1120 ntBASIC5.17□□□□□ -1.58
CDH11P55287 LINC02210-201ENST00000444561 288 ntBASIC5.17□□□□□ -1.58
CDH11P55287 AL161636.2-201ENST00000445179 927 ntBASIC5.17□□□□□ -1.58
CDH11P55287 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH11P55287 GEMIN2P1-201ENST00000454246 752 ntBASIC5.17□□□□□ -1.58
CDH11P55287 SNORD125-201ENST00000459538 96 ntBASIC5.17□□□□□ -1.58
CDH11P55287 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH11P55287 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH11P55287 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH11P55287 AC106872.4-201ENST00000510050 523 ntBASIC5.17□□□□□ -1.58
CDH11P55287 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH11P55287 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH11P55287 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.17□□□□□ -1.58
CDH11P55287 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.17□□□□□ -1.58
CDH11P55287 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH11P55287 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.17□□□□□ -1.58
CDH11P55287 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.17□□□□□ -1.58
CDH11P55287 PCNAP4-201ENST00000532690 730 ntBASIC5.17□□□□□ -1.58
CDH11P55287 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH11P55287 MTND4LP25-201ENST00000570218 163 ntBASIC5.17□□□□□ -1.58
CDH11P55287 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.17□□□□□ -1.58
CDH11P55287 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH11P55287 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH11P55287 OR11H2-202ENST00000641517 1085 ntBASIC5.17□□□□□ -1.58
CDH11P55287 OR8G3P-202ENST00000641572 1255 ntBASIC5.17□□□□□ -1.58
CDH11P55287 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH11P55287 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH11P55287 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH11P55287 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH11P55287 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH11P55287 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH11P55287 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CDH11P55287 AC010266.2-201ENST00000564741 3255 ntBASIC5.17□□□□□ -1.58
CDH11P55287 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH11P55287 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH11P55287 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH11P55287 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH11P55287 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH11P55287 TCP11X1-202ENST00000622971 1372 ntBASIC5.16□□□□□ -1.58
CDH11P55287 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH11P55287 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH11P55287 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH11P55287 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH11P55287 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH11P55287 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH11P55287 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH11P55287 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
CDH11P55287 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH11P55287 PARP4P2-201ENST00000446672 3326 ntBASIC5.16□□□□□ -1.58
CDH11P55287 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH11P55287 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH11P55287 HSPD1P7-201ENST00000447985 1686 ntBASIC5.16□□□□□ -1.58
CDH11P55287 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH11P55287 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH11P55287 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH11P55287 AC092681.1-201ENST00000297369 291 ntBASIC5.16□□□□□ -1.58
CDH11P55287 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH11P55287 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH11P55287 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH11P55287 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH11P55287 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH11P55287 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH11P55287 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CDH11P55287 U3.28-201ENST00000391249 210 ntBASIC5.16□□□□□ -1.58
CDH11P55287 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH11P55287 AL096711.1-201ENST00000404780 554 ntBASIC5.16□□□□□ -1.58
CDH11P55287 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH11P55287 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH11P55287 AC079809.1-201ENST00000415468 276 ntBASIC5.16□□□□□ -1.58
CDH11P55287 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH11P55287 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH11P55287 AC019205.1-201ENST00000421830 730 ntBASIC5.16□□□□□ -1.58
CDH11P55287 RPL17P35-201ENST00000432217 549 ntBASIC5.16□□□□□ -1.58
CDH11P55287 TMEM183AP1-205ENST00000432739 290 ntBASIC5.16□□□□□ -1.58
CDH11P55287 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH11P55287 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH11P55287 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH11P55287 RPL12P18-201ENST00000437175 325 ntBASIC5.16□□□□□ -1.58
CDH11P55287 SDR42E1P3-201ENST00000438345 502 ntBASIC5.16□□□□□ -1.58
CDH11P55287 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH11P55287 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH11P55287 CYCSP53-201ENST00000455540 265 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms