Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 RPSAP35-201ENST00000413753 818 ntBASIC6.24□□□□□ -1.41
CIITAP33076 Z93019.1-201ENST00000416450 973 ntBASIC6.24□□□□□ -1.41
CIITAP33076 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.24□□□□□ -1.41
CIITAP33076 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.24□□□□□ -1.41
CIITAP33076 AL590762.3-201ENST00000436372 640 ntBASIC6.24□□□□□ -1.41
CIITAP33076 MTND4P15-201ENST00000437913 1033 ntBASIC6.24□□□□□ -1.41
CIITAP33076 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.24□□□□□ -1.41
CIITAP33076 SPRYD7P1-201ENST00000443861 570 ntBASIC6.24□□□□□ -1.41
CIITAP33076 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC6.24□□□□□ -1.41
CIITAP33076 MTCYBP14-201ENST00000457471 715 ntBASIC6.24□□□□□ -1.41
CIITAP33076 RN7SL547P-201ENST00000490793 290 ntBASIC6.24□□□□□ -1.41
CIITAP33076 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CIITAP33076 AC021106.1-201ENST00000509020 1058 ntBASIC6.24□□□□□ -1.41
CIITAP33076 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC6.24□□□□□ -1.41
CIITAP33076 IGKV2-19-201ENST00000518132 283 ntBASIC6.24□□□□□ -1.41
CIITAP33076 BNIP3P39-201ENST00000601077 554 ntBASIC6.24□□□□□ -1.41
CIITAP33076 SUGT1P3-202ENST00000604259 383 ntBASIC6.24□□□□□ -1.41
CIITAP33076 AC079395.2-201ENST00000610982 737 ntBASIC6.24□□□□□ -1.41
CIITAP33076 AC079776.5-201ENST00000641920 211 ntBASIC6.24□□□□□ -1.41
CIITAP33076 AP000432.2-201ENST00000624164 2048 ntBASIC6.24□□□□□ -1.41
CIITAP33076 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.24□□□□□ -1.41
CIITAP33076 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CIITAP33076 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.24□□□□□ -1.41
CIITAP33076 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CIITAP33076 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CIITAP33076 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
CIITAP33076 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.23□□□□□ -1.41
CIITAP33076 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CIITAP33076 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CIITAP33076 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.23□□□□□ -1.41
CIITAP33076 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CIITAP33076 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CIITAP33076 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CIITAP33076 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CIITAP33076 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CIITAP33076 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CIITAP33076 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CIITAP33076 RNA5SP183-201ENST00000362452 119 ntBASIC6.23□□□□□ -1.41
CIITAP33076 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.23□□□□□ -1.41
CIITAP33076 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CIITAP33076 AL391361.1-201ENST00000405580 489 ntBASIC6.23□□□□□ -1.41
CIITAP33076 RN7SKP17-201ENST00000411242 351 ntBASIC6.23□□□□□ -1.41
CIITAP33076 Z85994.2-201ENST00000434327 452 ntBASIC6.23□□□□□ -1.41
CIITAP33076 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC6.23□□□□□ -1.41
CIITAP33076 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.23□□□□□ -1.41
CIITAP33076 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC6.23□□□□□ -1.41
CIITAP33076 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC6.23□□□□□ -1.41
CIITAP33076 AC105399.1-202ENST00000447303 205 ntBASIC6.23□□□□□ -1.41
CIITAP33076 AL035090.1-201ENST00000454835 332 ntBASIC6.23□□□□□ -1.41
CIITAP33076 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.23□□□□□ -1.41
CIITAP33076 AC011225.1-201ENST00000457751 369 ntBASIC6.23□□□□□ -1.41
CIITAP33076 RN7SL188P-201ENST00000469842 285 ntBASIC6.23□□□□□ -1.41
CIITAP33076 NPM1P28-201ENST00000492269 840 ntBASIC6.23□□□□□ -1.41
CIITAP33076 RPL7L1P4-201ENST00000513004 707 ntBASIC6.23□□□□□ -1.41
CIITAP33076 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.23□□□□□ -1.41
CIITAP33076 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
CIITAP33076 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.23□□□□□ -1.41
CIITAP33076 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.23□□□□□ -1.41
CIITAP33076 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.23□□□□□ -1.41
CIITAP33076 AC025857.2-201ENST00000602711 238 ntBASIC6.23□□□□□ -1.41
CIITAP33076 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.23□□□□□ -1.41
CIITAP33076 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CIITAP33076 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.23□□□□□ -1.41
CIITAP33076 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CIITAP33076 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CIITAP33076 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CIITAP33076 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CIITAP33076 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CIITAP33076 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CIITAP33076 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CIITAP33076 AC025470.1-201ENST00000510053 2032 ntBASIC6.23□□□□□ -1.41
CIITAP33076 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.23□□□□□ -1.41
CIITAP33076 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.23□□□□□ -1.41
CIITAP33076 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.22□□□□□ -1.41
CIITAP33076 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.22□□□□□ -1.41
CIITAP33076 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CIITAP33076 MTND4P21-201ENST00000453886 1357 ntBASIC6.22□□□□□ -1.41
CIITAP33076 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CIITAP33076 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CIITAP33076 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.22□□□□□ -1.41
CIITAP33076 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.22□□□□□ -1.41
CIITAP33076 MTCO1P11-201ENST00000429111 1528 ntBASIC6.22□□□□□ -1.41
CIITAP33076 AP000568.1-201ENST00000282964 442 ntBASIC6.22□□□□□ -1.41
CIITAP33076 RN7SKP162-201ENST00000363605 345 ntBASIC6.22□□□□□ -1.41
CIITAP33076 SNORA16A-201ENST00000384342 137 ntBASIC6.22□□□□□ -1.41
CIITAP33076 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CIITAP33076 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.22□□□□□ -1.41
CIITAP33076 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.22□□□□□ -1.41
CIITAP33076 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.22□□□□□ -1.41
CIITAP33076 PRUNEP1-201ENST00000425846 705 ntBASIC6.22□□□□□ -1.41
CIITAP33076 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.22□□□□□ -1.41
CIITAP33076 RPL7P56-201ENST00000429441 717 ntBASIC6.22□□□□□ -1.41
CIITAP33076 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.22□□□□□ -1.41
CIITAP33076 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.22□□□□□ -1.41
CIITAP33076 AL356390.1-201ENST00000455684 397 ntBASIC6.22□□□□□ -1.41
CIITAP33076 RPL7P45-201ENST00000455851 743 ntBASIC6.22□□□□□ -1.41
CIITAP33076 RN7SL51P-201ENST00000468230 285 ntBASIC6.22□□□□□ -1.41
CIITAP33076 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.22□□□□□ -1.41
CIITAP33076 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.22□□□□□ -1.41
CIITAP33076 AC016687.1-201ENST00000482574 353 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms