Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC8.35□□□□□ -1.07
CLIP1P30622 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
CLIP1P30622 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
CLIP1P30622 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC8.35□□□□□ -1.07
CLIP1P30622 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC8.35□□□□□ -1.07
CLIP1P30622 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC8.35□□□□□ -1.07
CLIP1P30622 MFSD4BP1-201ENST00000513330 1552 ntBASIC8.34□□□□□ -1.07
CLIP1P30622 AL022323.4-201ENST00000623980 13120 ntBASIC8.34□□□□□ -1.07
CLIP1P30622 LARS-201ENST00000274562 2213 ntTSL 2 BASIC8.34□□□□□ -1.07
CLIP1P30622 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC8.34□□□□□ -1.07
CLIP1P30622 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC8.34□□□□□ -1.07
CLIP1P30622 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC8.34□□□□□ -1.07
CLIP1P30622 RN7SKP103-201ENST00000363848 320 ntBASIC8.34□□□□□ -1.07
CLIP1P30622 RNA5SP90-201ENST00000364801 99 ntBASIC8.34□□□□□ -1.07
CLIP1P30622 AC136624.1-201ENST00000400791 413 ntBASIC8.34□□□□□ -1.07
CLIP1P30622 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC8.34□□□□□ -1.07
CLIP1P30622 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC8.34□□□□□ -1.07
CLIP1P30622 RPL37AP8-201ENST00000494116 276 ntBASIC8.34□□□□□ -1.07
CLIP1P30622 RNA5SP116-201ENST00000516132 98 ntBASIC8.34□□□□□ -1.07
CLIP1P30622 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC8.34□□□□□ -1.07
CLIP1P30622 CR383656.6-201ENST00000550518 394 ntBASIC8.34□□□□□ -1.07
CLIP1P30622 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC8.34□□□□□ -1.07
CLIP1P30622 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC8.34□□□□□ -1.07
CLIP1P30622 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
CLIP1P30622 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC8.34□□□□□ -1.07
CLIP1P30622 AL162431.4-201ENST00000604674 411 ntBASIC8.34□□□□□ -1.07
CLIP1P30622 AC099494.2-201ENST00000623371 978 ntBASIC8.34□□□□□ -1.07
CLIP1P30622 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
CLIP1P30622 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
CLIP1P30622 Z95114.1-201ENST00000624264 14574 ntBASIC8.34□□□□□ -1.08
CLIP1P30622 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CLIP1P30622 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CLIP1P30622 AC006210.2-201ENST00000367074 1545 ntBASIC8.33□□□□□ -1.08
CLIP1P30622 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CLIP1P30622 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CLIP1P30622 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
CLIP1P30622 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
CLIP1P30622 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
CLIP1P30622 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CLIP1P30622 RNA5SP87-201ENST00000384155 118 ntBASIC8.33□□□□□ -1.08
CLIP1P30622 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
CLIP1P30622 AC017019.1-201ENST00000426129 261 ntBASIC8.33□□□□□ -1.08
CLIP1P30622 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC8.33□□□□□ -1.08
CLIP1P30622 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CLIP1P30622 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC8.33□□□□□ -1.08
CLIP1P30622 REG1CP-206ENST00000447469 496 ntBASIC8.33□□□□□ -1.08
CLIP1P30622 RPS12P31-201ENST00000491419 398 ntBASIC8.33□□□□□ -1.08
CLIP1P30622 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC8.33□□□□□ -1.08
CLIP1P30622 AC004980.4-201ENST00000513375 203 ntBASIC8.33□□□□□ -1.08
CLIP1P30622 UBE2Q2P10-201ENST00000514854 900 ntBASIC8.33□□□□□ -1.08
CLIP1P30622 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CLIP1P30622 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC8.33□□□□□ -1.08
CLIP1P30622 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC8.33□□□□□ -1.08
CLIP1P30622 MIR7853-201ENST00000584820 132 ntBASIC8.33□□□□□ -1.08
CLIP1P30622 AC009597.2-201ENST00000604659 592 ntBASIC8.33□□□□□ -1.08
CLIP1P30622 AC011626.1-201ENST00000604710 562 ntBASIC8.33□□□□□ -1.08
CLIP1P30622 AC087783.2-201ENST00000605070 562 ntBASIC8.33□□□□□ -1.08
CLIP1P30622 MIR6839-201ENST00000620425 113 ntBASIC8.33□□□□□ -1.08
CLIP1P30622 AL353662.3-201ENST00000625131 237 ntBASIC8.33□□□□□ -1.08
CLIP1P30622 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CLIP1P30622 AC007159.1-201ENST00000566529 4706 ntBASIC8.33□□□□□ -1.08
CLIP1P30622 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CLIP1P30622 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CLIP1P30622 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CLIP1P30622 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
CLIP1P30622 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CLIP1P30622 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC8.32□□□□□ -1.08
CLIP1P30622 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CLIP1P30622 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC8.32□□□□□ -1.08
CLIP1P30622 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CLIP1P30622 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
CLIP1P30622 RNU1-74P-201ENST00000384108 171 ntBASIC8.32□□□□□ -1.08
CLIP1P30622 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC8.32□□□□□ -1.08
CLIP1P30622 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC8.32□□□□□ -1.08
CLIP1P30622 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC8.32□□□□□ -1.08
CLIP1P30622 AC006466.1-201ENST00000438721 289 ntBASIC8.32□□□□□ -1.08
CLIP1P30622 RPL34P20-201ENST00000442771 351 ntBASIC8.32□□□□□ -1.08
CLIP1P30622 AC097484.1-201ENST00000471148 389 ntBASIC8.32□□□□□ -1.08
CLIP1P30622 RPS29P22-201ENST00000472363 168 ntBASIC8.32□□□□□ -1.08
CLIP1P30622 RPL7P40-201ENST00000481703 745 ntBASIC8.32□□□□□ -1.08
CLIP1P30622 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC8.32□□□□□ -1.08
CLIP1P30622 IGHVII-44-2-201ENST00000517728 250 ntBASIC8.32□□□□□ -1.08
CLIP1P30622 HIGD1AP5-201ENST00000529959 259 ntBASIC8.32□□□□□ -1.08
CLIP1P30622 MIR4691-201ENST00000583764 85 ntBASIC8.32□□□□□ -1.08
CLIP1P30622 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CLIP1P30622 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
CLIP1P30622 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CLIP1P30622 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC8.32□□□□□ -1.08
CLIP1P30622 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CLIP1P30622 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CLIP1P30622 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC8.31□□□□□ -1.08
CLIP1P30622 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
CLIP1P30622 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
CLIP1P30622 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
CLIP1P30622 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CLIP1P30622 AL360081.1-201ENST00000428299 555 ntBASIC8.31□□□□□ -1.08
CLIP1P30622 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC8.31□□□□□ -1.08
CLIP1P30622 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CLIP1P30622 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CLIP1P30622 AC111000.6-201ENST00000514471 709 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms