Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.2□□□□□ -1.42
COL2A1P02458 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.2□□□□□ -1.42
COL2A1P02458 RAB9BP1-201ENST00000519581 626 ntBASIC6.2□□□□□ -1.42
COL2A1P02458 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.2□□□□□ -1.42
COL2A1P02458 AP000346.3-201ENST00000622821 210 ntBASIC6.2□□□□□ -1.42
COL2A1P02458 AC015660.5-201ENST00000623238 564 ntBASIC6.2□□□□□ -1.42
COL2A1P02458 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL2A1P02458 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.2□□□□□ -1.42
COL2A1P02458 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.2□□□□□ -1.42
COL2A1P02458 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
COL2A1P02458 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.2□□□□□ -1.42
COL2A1P02458 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL2A1P02458 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.19□□□□□ -1.42
COL2A1P02458 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
COL2A1P02458 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL2A1P02458 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL2A1P02458 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL2A1P02458 EPS15P1-202ENST00000459691 2071 ntBASIC6.19□□□□□ -1.42
COL2A1P02458 AC015799.1-201ENST00000622996 3122 ntBASIC6.19□□□□□ -1.42
COL2A1P02458 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
COL2A1P02458 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL2A1P02458 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
COL2A1P02458 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL2A1P02458 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
COL2A1P02458 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL2A1P02458 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL2A1P02458 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL2A1P02458 RN7SKP185-201ENST00000362813 326 ntBASIC6.19□□□□□ -1.42
COL2A1P02458 RN7SKP95-201ENST00000362860 303 ntBASIC6.19□□□□□ -1.42
COL2A1P02458 RNU1-74P-201ENST00000384108 171 ntBASIC6.19□□□□□ -1.42
COL2A1P02458 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.19□□□□□ -1.42
COL2A1P02458 AL138878.2-201ENST00000440581 1241 ntBASIC6.19□□□□□ -1.42
COL2A1P02458 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.19□□□□□ -1.42
COL2A1P02458 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.19□□□□□ -1.42
COL2A1P02458 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.19□□□□□ -1.42
COL2A1P02458 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL2A1P02458 GLUD1P3-202ENST00000508551 200 ntBASIC6.19□□□□□ -1.42
COL2A1P02458 AC134698.5-201ENST00000519444 336 ntBASIC6.19□□□□□ -1.42
COL2A1P02458 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL2A1P02458 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.19□□□□□ -1.42
COL2A1P02458 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL2A1P02458 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.19□□□□□ -1.42
COL2A1P02458 AC108738.1-201ENST00000603703 237 ntBASIC6.19□□□□□ -1.42
COL2A1P02458 AC008745.1-201ENST00000604064 271 ntBASIC6.19□□□□□ -1.42
COL2A1P02458 AC091905.4-201ENST00000623432 202 ntBASIC6.19□□□□□ -1.42
COL2A1P02458 AC135068.12-201ENST00000637370 931 ntBASIC6.19□□□□□ -1.42
COL2A1P02458 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL2A1P02458 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
COL2A1P02458 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL2A1P02458 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.19□□□□□ -1.42
COL2A1P02458 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL2A1P02458 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL2A1P02458 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.18□□□□□ -1.42
COL2A1P02458 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
COL2A1P02458 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.18□□□□□ -1.42
COL2A1P02458 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL2A1P02458 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL2A1P02458 AC126755.2-208ENST00000327792 462 ntBASIC6.18□□□□□ -1.42
COL2A1P02458 AC138969.1-213ENST00000331436 462 ntBASIC6.18□□□□□ -1.42
COL2A1P02458 RN7SKP113-201ENST00000363891 295 ntBASIC6.18□□□□□ -1.42
COL2A1P02458 RNA5SP90-201ENST00000364801 99 ntBASIC6.18□□□□□ -1.42
COL2A1P02458 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL2A1P02458 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL2A1P02458 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
COL2A1P02458 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.18□□□□□ -1.42
COL2A1P02458 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.18□□□□□ -1.42
COL2A1P02458 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.18□□□□□ -1.42
COL2A1P02458 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.18□□□□□ -1.42
COL2A1P02458 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.18□□□□□ -1.42
COL2A1P02458 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.18□□□□□ -1.42
COL2A1P02458 TPT1P12-201ENST00000448968 492 ntBASIC6.18□□□□□ -1.42
COL2A1P02458 RPS3AP53-201ENST00000454716 778 ntBASIC6.18□□□□□ -1.42
COL2A1P02458 AC092905.1-201ENST00000467527 949 ntBASIC6.18□□□□□ -1.42
COL2A1P02458 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.18□□□□□ -1.42
COL2A1P02458 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.18□□□□□ -1.42
COL2A1P02458 OR8Q1P-201ENST00000526467 655 ntBASIC6.18□□□□□ -1.42
COL2A1P02458 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.18□□□□□ -1.42
COL2A1P02458 AC209154.1-201ENST00000582156 337 ntBASIC6.18□□□□□ -1.42
COL2A1P02458 AC005084.1-201ENST00000605160 304 ntBASIC6.18□□□□□ -1.42
COL2A1P02458 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.18□□□□□ -1.42
COL2A1P02458 AL353662.3-201ENST00000625131 237 ntBASIC6.18□□□□□ -1.42
COL2A1P02458 AC073869.10-201ENST00000642016 354 ntBASIC6.18□□□□□ -1.42
COL2A1P02458 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL2A1P02458 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.18□□□□□ -1.42
COL2A1P02458 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.18□□□□□ -1.42
COL2A1P02458 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL2A1P02458 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL2A1P02458 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL2A1P02458 AC007996.1-201ENST00000620414 2821 ntBASIC6.18□□□□□ -1.42
COL2A1P02458 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL2A1P02458 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL2A1P02458 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL2A1P02458 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL2A1P02458 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL2A1P02458 RNU1-32P-201ENST00000363937 159 ntBASIC6.17□□□□□ -1.42
COL2A1P02458 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.17□□□□□ -1.42
COL2A1P02458 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
COL2A1P02458 C4BPAP2-201ENST00000428434 478 ntBASIC6.17□□□□□ -1.42
COL2A1P02458 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.17□□□□□ -1.42
COL2A1P02458 NDUFB4P8-201ENST00000435351 367 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 563.6 ms