Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AL513325.1-201ENST00000417716 1034 ntBASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 AC092570.3-201ENST00000420113 693 ntBASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 RPL34P3-201ENST00000421454 338 ntBASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 AL445928.1-201ENST00000435545 222 ntBASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 AC079922.1-201ENST00000443291 359 ntBASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 AC096992.1-201ENST00000459808 709 ntBASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 AC093719.1-201ENST00000480427 441 ntBASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 RPL23AP73-201ENST00000492507 471 ntBASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 CCDC11P1-201ENST00000503137 1162 ntBASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 RN7SKP287-201ENST00000516546 266 ntBASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 RNU6-334P-201ENST00000517072 102 ntBASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 DUXAP5-201ENST00000529668 529 ntBASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 AC027544.3-201ENST00000535082 757 ntBASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 AC093424.1-201ENST00000604999 338 ntBASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 AC004477.3-201ENST00000614061 590 ntBASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 AL139099.4-201ENST00000614802 114 ntBASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 AL049767.1-202ENST00000637826 242 ntBASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 AC083837.1-201ENST00000565297 2994 ntBASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 OLMALINC-203ENST00000641087 3779 ntBASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.88□□□□□ -1.31
CTDP1Q9Y5B0 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 AC068870.3-201ENST00000625077 2536 ntBASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 Z83820.1-201ENST00000456978 1499 ntBASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 OR7E101P-201ENST00000400428 513 ntBASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 AC234781.4-201ENST00000419384 244 ntBASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 AK4P4-201ENST00000419465 646 ntBASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 MGAT2P2-201ENST00000427194 797 ntBASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 AL392003.1-201ENST00000434394 243 ntBASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 RPS7P3-201ENST00000443360 580 ntBASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 MOB1AP2-201ENST00000446060 614 ntBASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 THAP12P8-201ENST00000447914 2115 ntBASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 RN7SL273P-201ENST00000481561 299 ntBASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 RN7SL214P-201ENST00000487317 265 ntBASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 AC023538.1-201ENST00000534576 736 ntBASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 MTND2P17-201ENST00000550281 688 ntBASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 AC007494.1-201ENST00000562293 760 ntBASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 AC119403.2-201ENST00000590960 598 ntBASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 AC009237.12-201ENST00000604755 742 ntBASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 OR8G7P-201ENST00000616658 848 ntBASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 AL445528.2-201ENST00000620582 470 ntBASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 AL078595.3-201ENST00000623815 1166 ntBASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.87□□□□□ -1.31
CTDP1Q9Y5B0 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CTDP1Q9Y5B0 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms