Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 AC006206.1-201ENST00000544842 3387 ntBASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
ATG4BQ9Y4P1 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 AL354868.1-201ENST00000417077 482 ntBASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 OR6D1P-201ENST00000436165 939 ntBASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 AC018638.3-201ENST00000461273 132 ntBASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 AC074087.1-201ENST00000512059 724 ntBASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 AL121839.1-201ENST00000556233 1185 ntBASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 RBM22P12-201ENST00000567098 1255 ntBASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 AC138473.1-201ENST00000605717 526 ntBASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 MIR6768-201ENST00000610734 72 ntBASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 AC007938.2-201ENST00000604666 2634 ntBASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
ATG4BQ9Y4P1 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 RNA5SP453-201ENST00000362503 119 ntBASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 RNU6-697P-201ENST00000363348 107 ntBASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 RN7SKP6-201ENST00000364795 319 ntBASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 AL513325.1-201ENST00000417716 1034 ntBASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 AC019185.1-201ENST00000442718 389 ntBASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 AC073909.1-201ENST00000447112 999 ntBASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 IGBP1P3-201ENST00000447449 1000 ntBASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 RN7SL188P-201ENST00000469842 285 ntBASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 SEPT7P6-201ENST00000469999 1143 ntBASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 AC091544.1-201ENST00000484702 348 ntBASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 AL136038.1-201ENST00000497246 351 ntBASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 AC011411.1-201ENST00000509592 876 ntBASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 AC009237.13-201ENST00000603193 276 ntBASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 FO393422.1-201ENST00000603908 708 ntBASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 AC104695.2-201ENST00000605056 775 ntBASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 AL691477.1-201ENST00000624398 162 ntBASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 AC007683.2-201ENST00000624681 714 ntBASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 AL049767.1-202ENST00000637826 242 ntBASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 SAMM50P1-201ENST00000455403 1399 ntBASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
ATG4BQ9Y4P1 AL031595.2-201ENST00000624215 19071 ntBASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ATG4BQ9Y4P1 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms