Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.47□□□□□ -1.37
SNED1Q8TER0 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.47□□□□□ -1.37
SNED1Q8TER0 AC008814.1-201ENST00000603797 406 ntBASIC6.47□□□□□ -1.37
SNED1Q8TER0 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.47□□□□□ -1.37
SNED1Q8TER0 AL158152.1-201ENST00000602652 1435 ntBASIC6.47□□□□□ -1.37
SNED1Q8TER0 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.47□□□□□ -1.37
SNED1Q8TER0 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.47□□□□□ -1.37
SNED1Q8TER0 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SNED1Q8TER0 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.46□□□□□ -1.37
SNED1Q8TER0 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.46□□□□□ -1.37
SNED1Q8TER0 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.46□□□□□ -1.37
SNED1Q8TER0 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.37
SNED1Q8TER0 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.46□□□□□ -1.38
SNED1Q8TER0 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SNED1Q8TER0 U3.10-201ENST00000364459 214 ntBASIC6.46□□□□□ -1.38
SNED1Q8TER0 AC068538.1-201ENST00000376856 336 ntBASIC6.46□□□□□ -1.38
SNED1Q8TER0 MIR105-1-201ENST00000385222 81 ntBASIC6.46□□□□□ -1.38
SNED1Q8TER0 RPL11P3-201ENST00000395256 523 ntBASIC6.46□□□□□ -1.38
SNED1Q8TER0 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.46□□□□□ -1.38
SNED1Q8TER0 AC092570.3-201ENST00000420113 693 ntBASIC6.46□□□□□ -1.38
SNED1Q8TER0 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.46□□□□□ -1.38
SNED1Q8TER0 OR10T1P-201ENST00000424327 947 ntBASIC6.46□□□□□ -1.38
SNED1Q8TER0 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.46□□□□□ -1.38
SNED1Q8TER0 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.46□□□□□ -1.38
SNED1Q8TER0 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.46□□□□□ -1.38
SNED1Q8TER0 snoU13.20-201ENST00000459180 104 ntBASIC6.46□□□□□ -1.38
SNED1Q8TER0 AC092754.1-201ENST00000472975 479 ntBASIC6.46□□□□□ -1.38
SNED1Q8TER0 AC093267.1-201ENST00000489176 961 ntBASIC6.46□□□□□ -1.38
SNED1Q8TER0 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.46□□□□□ -1.38
SNED1Q8TER0 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.46□□□□□ -1.38
SNED1Q8TER0 GCSHP4-201ENST00000538792 439 ntBASIC6.46□□□□□ -1.38
SNED1Q8TER0 AC079414.3-201ENST00000612986 1090 ntBASIC6.46□□□□□ -1.38
SNED1Q8TER0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.46□□□□□ -1.38
SNED1Q8TER0 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
SNED1Q8TER0 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SNED1Q8TER0 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SNED1Q8TER0 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
SNED1Q8TER0 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SNED1Q8TER0 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SNED1Q8TER0 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SNED1Q8TER0 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SNED1Q8TER0 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SNED1Q8TER0 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SNED1Q8TER0 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SNED1Q8TER0 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SNED1Q8TER0 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SNED1Q8TER0 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SNED1Q8TER0 RPS4XP9-201ENST00000405151 780 ntBASIC6.45□□□□□ -1.38
SNED1Q8TER0 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.45□□□□□ -1.38
SNED1Q8TER0 CHEK2P3-201ENST00000416118 248 ntBASIC6.45□□□□□ -1.38
SNED1Q8TER0 H3F3BP1-201ENST00000440551 403 ntBASIC6.45□□□□□ -1.38
SNED1Q8TER0 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.45□□□□□ -1.38
SNED1Q8TER0 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.45□□□□□ -1.38
SNED1Q8TER0 AC073264.2-201ENST00000448886 166 ntBASIC6.45□□□□□ -1.38
SNED1Q8TER0 SNORD125-201ENST00000459538 96 ntBASIC6.45□□□□□ -1.38
SNED1Q8TER0 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SNED1Q8TER0 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.45□□□□□ -1.38
SNED1Q8TER0 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.45□□□□□ -1.38
SNED1Q8TER0 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SNED1Q8TER0 RAB9BP1-201ENST00000519581 626 ntBASIC6.45□□□□□ -1.38
SNED1Q8TER0 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.45□□□□□ -1.38
SNED1Q8TER0 UBE2FP2-201ENST00000566646 462 ntBASIC6.45□□□□□ -1.38
SNED1Q8TER0 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SNED1Q8TER0 AL161616.1-201ENST00000611867 286 ntBASIC6.45□□□□□ -1.38
SNED1Q8TER0 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.45□□□□□ -1.38
SNED1Q8TER0 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.45□□□□□ -1.38
SNED1Q8TER0 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.45□□□□□ -1.38
SNED1Q8TER0 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SNED1Q8TER0 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SNED1Q8TER0 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
SNED1Q8TER0 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SNED1Q8TER0 UGT2B24P-201ENST00000514441 1597 ntBASIC6.45□□□□□ -1.38
SNED1Q8TER0 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.45□□□□□ -1.38
SNED1Q8TER0 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
SNED1Q8TER0 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SNED1Q8TER0 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SNED1Q8TER0 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SNED1Q8TER0 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SNED1Q8TER0 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SNED1Q8TER0 RNA5SP428-201ENST00000365129 132 ntBASIC6.44□□□□□ -1.38
SNED1Q8TER0 AL356967.1-201ENST00000406305 431 ntBASIC6.44□□□□□ -1.38
SNED1Q8TER0 RNU4-64P-201ENST00000410795 131 ntBASIC6.44□□□□□ -1.38
SNED1Q8TER0 MTND4LP17-201ENST00000414607 293 ntBASIC6.44□□□□□ -1.38
SNED1Q8TER0 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.44□□□□□ -1.38
SNED1Q8TER0 AL590399.2-201ENST00000427536 309 ntBASIC6.44□□□□□ -1.38
SNED1Q8TER0 HSPE1P27-201ENST00000430808 296 ntBASIC6.44□□□□□ -1.38
SNED1Q8TER0 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.44□□□□□ -1.38
SNED1Q8TER0 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.44□□□□□ -1.38
SNED1Q8TER0 AL590399.4-201ENST00000436561 601 ntBASIC6.44□□□□□ -1.38
SNED1Q8TER0 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.44□□□□□ -1.38
SNED1Q8TER0 AC073072.2-201ENST00000447425 348 ntBASIC6.44□□□□□ -1.38
SNED1Q8TER0 RN7SL205P-201ENST00000490174 284 ntBASIC6.44□□□□□ -1.38
SNED1Q8TER0 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.44□□□□□ -1.38
SNED1Q8TER0 OR5AN2P-201ENST00000534535 896 ntBASIC6.44□□□□□ -1.38
SNED1Q8TER0 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.44□□□□□ -1.38
SNED1Q8TER0 RN7SL52P-201ENST00000584271 284 ntBASIC6.44□□□□□ -1.38
SNED1Q8TER0 AL023583.1-201ENST00000607518 1143 ntBASIC6.44□□□□□ -1.38
SNED1Q8TER0 AL356752.1-201ENST00000615844 593 ntBASIC6.44□□□□□ -1.38
SNED1Q8TER0 RN7SL722P-201ENST00000617780 284 ntBASIC6.44□□□□□ -1.38
SNED1Q8TER0 RN7SL565P-201ENST00000618246 284 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms