Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 AC084121.1-201ENST00000533882 835 ntBASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 AC125612.1-201ENST00000547580 377 ntBASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 AC090115.2-201ENST00000548060 883 ntBASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 DPPA3P2-201ENST00000553589 478 ntBASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 AC026956.1-201ENST00000558741 396 ntBASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 AC010546.1-201ENST00000569391 485 ntBASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 MIR3915-201ENST00000578518 97 ntBASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 AC245052.7-201ENST00000601161 359 ntBASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 AC093765.1-201ENST00000603758 881 ntBASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 AC131235.4-201ENST00000609288 620 ntBASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 AL139418.1-201ENST00000613613 177 ntBASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 AC026951.2-201ENST00000613847 241 ntBASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 uc_338.31-201ENST00000615595 186 ntBASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 AP001052.1-201ENST00000626421 99 ntBASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 SMG1P5-202ENST00000529428 4219 ntBASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 SMG1P2-201ENST00000566127 4221 ntBASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
NPAS4Q8IUM7 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.24
NPAS4Q8IUM7 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.27□□□□□ -1.24
NPAS4Q8IUM7 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.24
NPAS4Q8IUM7 AC140479.2-201ENST00000421567 3130 ntBASIC7.27□□□□□ -1.24
NPAS4Q8IUM7 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
NPAS4Q8IUM7 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.27□□□□□ -1.24
NPAS4Q8IUM7 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.27□□□□□ -1.24
NPAS4Q8IUM7 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AC008555.1-201ENST00000561778 2757 ntBASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 UG0898H09-202ENST00000623646 7040 ntBASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 RNU4-75P-201ENST00000364621 146 ntBASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 RNA5SP279-201ENST00000365513 117 ntBASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 RNU6-1200P-201ENST00000384162 107 ntBASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 Y_RNA.560-201ENST00000384689 102 ntBASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AL031577.2-201ENST00000404133 280 ntBASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AL445213.1-201ENST00000412589 747 ntBASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AL773545.3-201ENST00000414297 706 ntBASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AL663061.1-201ENST00000416625 580 ntBASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AC099782.1-201ENST00000425889 474 ntBASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 IFNNP1-201ENST00000429219 553 ntBASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AL590103.1-201ENST00000434488 307 ntBASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AC016724.1-201ENST00000453215 421 ntBASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 RPS14P8-201ENST00000478778 369 ntBASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AC091874.2-201ENST00000505889 720 ntBASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 IGBP1P5-201ENST00000507524 1000 ntBASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 HMGB1P23-201ENST00000518743 568 ntBASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AC092709.1-201ENST00000521355 1045 ntBASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AC135983.3-201ENST00000528049 1226 ntBASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 ULK4P1-202ENST00000565174 503 ntBASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AC122134.1-201ENST00000565664 1104 ntBASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.27□□□□□ -1.25
NPAS4Q8IUM7 SNORD96A-201ENST00000606577 79 ntBASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms