Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 GAPDHP48-201ENST00000436626 961 ntBASIC5.55□□□□□ -1.52
RAE1P78406 ELOCP11-201ENST00000436690 332 ntBASIC5.55□□□□□ -1.52
RAE1P78406 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.55□□□□□ -1.52
RAE1P78406 ARF4P4-201ENST00000439608 520 ntBASIC5.55□□□□□ -1.52
RAE1P78406 ATP5LP2-201ENST00000440646 311 ntBASIC5.55□□□□□ -1.52
RAE1P78406 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.55□□□□□ -1.52
RAE1P78406 ELOCP16-201ENST00000444494 332 ntBASIC5.55□□□□□ -1.52
RAE1P78406 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RAE1P78406 MTND1P33-201ENST00000446251 917 ntBASIC5.55□□□□□ -1.52
RAE1P78406 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RAE1P78406 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.55□□□□□ -1.52
RAE1P78406 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.55□□□□□ -1.52
RAE1P78406 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.55□□□□□ -1.52
RAE1P78406 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.55□□□□□ -1.52
RAE1P78406 AC023194.2-201ENST00000465398 406 ntBASIC5.55□□□□□ -1.52
RAE1P78406 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.55□□□□□ -1.52
RAE1P78406 RN7SL193P-201ENST00000491708 276 ntBASIC5.55□□□□□ -1.52
RAE1P78406 AC010374.1-201ENST00000503762 1237 ntBASIC5.55□□□□□ -1.52
RAE1P78406 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.55□□□□□ -1.52
RAE1P78406 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.55□□□□□ -1.52
RAE1P78406 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.55□□□□□ -1.52
RAE1P78406 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.55□□□□□ -1.52
RAE1P78406 IGLV3-30-201ENST00000524362 298 ntBASIC5.55□□□□□ -1.52
RAE1P78406 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.55□□□□□ -1.52
RAE1P78406 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.55□□□□□ -1.52
RAE1P78406 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.55□□□□□ -1.52
RAE1P78406 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.55□□□□□ -1.52
RAE1P78406 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.55□□□□□ -1.52
RAE1P78406 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.55□□□□□ -1.52
RAE1P78406 AL845552.1-201ENST00000556820 323 ntBASIC5.55□□□□□ -1.52
RAE1P78406 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.55□□□□□ -1.52
RAE1P78406 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
RAE1P78406 MIR4420-201ENST00000583944 77 ntBASIC5.55□□□□□ -1.52
RAE1P78406 AC090236.2-201ENST00000587933 1101 ntBASIC5.55□□□□□ -1.52
RAE1P78406 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RAE1P78406 AL022067.1-201ENST00000602426 454 ntBASIC5.55□□□□□ -1.52
RAE1P78406 AC099785.1-201ENST00000605697 437 ntBASIC5.55□□□□□ -1.52
RAE1P78406 AC087683.2-201ENST00000611384 326 ntBASIC5.55□□□□□ -1.52
RAE1P78406 MIR6889-201ENST00000613185 59 ntBASIC5.55□□□□□ -1.52
RAE1P78406 AL139099.4-201ENST00000614802 114 ntBASIC5.55□□□□□ -1.52
RAE1P78406 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.55□□□□□ -1.52
RAE1P78406 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.55□□□□□ -1.52
RAE1P78406 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAE1P78406 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAE1P78406 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAE1P78406 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RAE1P78406 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.55□□□□□ -1.52
RAE1P78406 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.55□□□□□ -1.52
RAE1P78406 AC093225.1-201ENST00000506867 1408 ntBASIC5.55□□□□□ -1.52
RAE1P78406 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.55□□□□□ -1.52
RAE1P78406 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.55□□□□□ -1.52
RAE1P78406 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.55□□□□□ -1.52
RAE1P78406 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.55□□□□□ -1.52
RAE1P78406 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAE1P78406 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.55□□□□□ -1.52
RAE1P78406 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RAE1P78406 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.55□□□□□ -1.52
RAE1P78406 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.55□□□□□ -1.52
RAE1P78406 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.55□□□□□ -1.52
RAE1P78406 PARP4P2-201ENST00000446672 3326 ntBASIC5.54□□□□□ -1.52
RAE1P78406 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RAE1P78406 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.54□□□□□ -1.52
RAE1P78406 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RAE1P78406 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RAE1P78406 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
RAE1P78406 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RAE1P78406 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RAE1P78406 MTHFD2P5-201ENST00000320415 844 ntBASIC5.54□□□□□ -1.52
RAE1P78406 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.54□□□□□ -1.52
RAE1P78406 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RAE1P78406 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RAE1P78406 AF228730.1-201ENST00000397972 663 ntBASIC5.54□□□□□ -1.52
RAE1P78406 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.54□□□□□ -1.52
RAE1P78406 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.54□□□□□ -1.52
RAE1P78406 RN7SKP17-201ENST00000411242 351 ntBASIC5.54□□□□□ -1.52
RAE1P78406 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.54□□□□□ -1.52
RAE1P78406 RPS26P13-201ENST00000419030 330 ntBASIC5.54□□□□□ -1.52
RAE1P78406 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.54□□□□□ -1.52
RAE1P78406 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.54□□□□□ -1.52
RAE1P78406 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.54□□□□□ -1.52
RAE1P78406 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.54□□□□□ -1.52
RAE1P78406 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RAE1P78406 MED6P1-201ENST00000439659 713 ntBASIC5.54□□□□□ -1.52
RAE1P78406 ELOCP13-201ENST00000443934 329 ntBASIC5.54□□□□□ -1.52
RAE1P78406 AL157827.1-201ENST00000447622 132 ntBASIC5.54□□□□□ -1.52
RAE1P78406 CFL1P4-201ENST00000451536 498 ntBASIC5.54□□□□□ -1.52
RAE1P78406 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RAE1P78406 PPIAP27-201ENST00000453800 265 ntBASIC5.54□□□□□ -1.52
RAE1P78406 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.54□□□□□ -1.52
RAE1P78406 AC093166.4-201ENST00000457867 318 ntBASIC5.54□□□□□ -1.52
RAE1P78406 AC009963.3-201ENST00000458090 486 ntBASIC5.54□□□□□ -1.52
RAE1P78406 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RAE1P78406 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.54□□□□□ -1.52
RAE1P78406 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.54□□□□□ -1.52
RAE1P78406 RPS3AP15-201ENST00000483874 781 ntBASIC5.54□□□□□ -1.52
RAE1P78406 AC105233.1-201ENST00000498840 781 ntBASIC5.54□□□□□ -1.52
RAE1P78406 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.54□□□□□ -1.52
RAE1P78406 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.54□□□□□ -1.52
RAE1P78406 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.54□□□□□ -1.52
RAE1P78406 AC021146.5-201ENST00000503544 545 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms